Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00712 ATGGGTTGCAGGAACAGGGCGGAGTCGTTCGAAGAGGATCATAGCGGAGCATCGTCACTAAGCGAGGCGTTACTGTTAACGACGATGTGCATCATAGGCCTCCCCGTCGATGTCCACGTTAAGGATGGCTCCGTCTATTCTGGAATCTTCCACACTGCCTCTGTCGATTCCGATTACGGTATCGTTTTGAAGAAGGCAAGGATGACCAAGAAGGGAAAGGGAAAGACCAATGTGGGAAAGGAGGATTTGGTAGATACACTGGTAGTTCTATCTCGTGATTTGGTGCAAGTTGTTGCTAAGGAAGTAATGCTTCCTACCAAGAGTTTTGGTGGAAATATAACTAGTGATGATGGCGAAACAGTTATGCACGATATGTGTTCTCGTGAGAGTCCAACATGTGAGGTAGAGAATCATATGAAGTCTTTGACGGATGTAAAGCATGTTAATCAATCAAGGACTCCAGTCCAAAATGAGAATGGATTTACCCATTGTCTTCCACCTTCAACTGCTGCCATTGATTTTGAAAGAAATAAGTTGCCTGTTAATCAGATGAGAACTTCCACAGAAGTTGATTGCGGGAAAACTGATAAAACAAATATTGGAGAGATTGAAGCATATTCTGGTTCCTCAATCAACTGTAGACAGGCTGGAGATGACAATTCAAAAAGGAATGCTGATGACTTCAGAGAGAAGCCTGAGTTTGTTCAAGGAAAACTTGATGAGAAGAATCAAGTCATCAAATCAACTCATGAAACTAATACTCATCTTGTCCAAGTAGAAGCTGTTGAGAATAGAAGCTATATGGCATCAAATGCTTCTGATAATGGGTTTTATAGAACTAACGGTAATGCATCTGTTAAAGCTGATGATCGGTGTAGTGAAAGGTCTACTACAGCAAATTCTGCTCCTATGAGTTCTGCCCAAGGCATAGATCTCATTTTAGAGTCACACAATATGCCAGAAAAATCTGTTGAGATGTCTGCTCCAAAGGGTACAGATTCTACCAGAAATACTAAGGAATTTAAGCTCAACCCAGCGGCCAAAATTTTCTCTCCATCTTTTGTAAATCCTATTTCAACAACTGCTTCCATGCCTATTTCTGCAAACATGGTTTATGTACCAAATAGTTCTCCTGTGGTACATACTGCTGCTGTTCAACCTGAAACCGGTCTCAGTACTTTTGCTTCACTGCCTTCCATGCCTGTTAAGGTTGCACAGTATAGTAACTTGACAATAGGAAATGGTGGAAGTGGTTCTCAATTTTCACCTCCTATTGTTGGACAACTTGCTCATAACAGAGCACAACCTCTACGCTATGGTGCACATTACCCTCCCGTTTTGTCTGAACATGCTTATTTGCAACCCAGCTCCCCTGCTGTTATGGTTGGACGTTCCGGGCAGTTAGTCTATGTTCATTCAGTTTCCCATGATTTGGTTCATGGTGGAACTGCTATCTCCTCAATCTCAGCTCGTCCTATGTTGAATCATGTACAATATCCAAAGCAGCAAGGAGCCTCAGTTGGTCAGCCAATACCAATTTGTGTACCCCCGCCAATCCTAACGAATGCGCCGCAACCCTTTGCTCTTCAAAGCCACATTCCGCTTCTGCAACCTGGGTTTCCTGTAACTCGACCTGTTTCAGTACCCGGGCCAAATGGTTACTATGGAGCTAAATTTTCATGA 1683 0.4296 MGCRNRAESFEEDHSGASSLSEALLLTTMCIIGLPVDVHVKDGSVYSGIFHTASVDSDYGIVLKKARMTKKGKGKTNVGKEDLVDTLVVLSRDLVQVVAKEVMLPTKSFGGNITSDDGETVMHDMCSRESPTCEVENHMKSLTDVKHVNQSRTPVQNENGFTHCLPPSTAAIDFERNKLPVNQMRTSTEVDCGKTDKTNIGEIEAYSGSSINCRQAGDDNSKRNADDFREKPEFVQGKLDEKNQVIKSTHETNTHLVQVEAVENRSYMASNASDNGFYRTNGNASVKADDRCSERSTTANSAPMSSAQGIDLILESHNMPEKSVEMSAPKGTDSTRNTKEFKLNPAAKIFSPSFVNPISTTASMPISANMVYVPNSSPVVHTAAVQPETGLSTFASLPSMPVKVAQYSNLTIGNGGSGSQFSPPIVGQLAHNRAQPLRYGAHYPPVLSEHAYLQPSSPAVMVGRSGQLVYVHSVSHDLVHGGTAISSISARPMLNHVQYPKQQGASVGQPIPICVPPPILTNAPQPFALQSHIPLLQPGFPVTRPVSVPGPNGYYGAKFS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00712 560 Pfam Ataxin 2 SM domain 22 100 IPR025852 -
Aip01g00712 560 PANTHER ATAXIN 2-RELATED 1 556 IPR045117 GO:0003723
Aip01g00712 560 PANTHER POLYADENYLATE-BINDING PROTEIN INTERACTING PROTEIN 1 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00712 Aip-Chr1 11775240 11782296 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00712 - - adu:107480281 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00712 01 11775240 11782296 Aip01g00712 01 11775240 11782296 ECH