Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00691 ATGGTAAAAGGCAGAAAAGTGGATTTGAAAGGGCTCCACTGTGCTTCAGGAACTCCAACGAATCCTCCTTCTGGGATTCCACTGCCGGATAAGAGGACTCTGGAATTGATCCTTGACAAGCTTCAAAAGAAGGACACTTACGGTGTGTTCGCAGAACCAGTTGATCCAGAAGAGCTTCCCGATTATCACGATGTAATTGAGCATCCCATGGACTTTGCCACGGTCAGGAAGAAGTTGGCAAATGGATCCTATCCCACTTTGGAGCAATTTGAGAGTGATGTATTTTTAATCTGCTCAAATGCAATGCAATACAATGCACCAGAGACTATTTACCACAAACAGGCACGATCAATACAGGAACAAGGGCGGAAAAAGTTCGAGAAGTTAAGGATAGACTTTGAACGCTCCCAGGCTGAACTGAAACTAGAACAGAAAACAAGGGCTATTTCTTTGGTTAAAAAACAAGGAAAGAAGCCACTGGGTCGAGCCTCACAGGAACCCATTGGCTCTGATTTTTCCTCAGGGGCAACTCTTGCTACCATTAATGATGTACAGCCAACTTCTTTTCCAATGCAAGGCGGTAGCTGTGAGAGACCTGGACTAATTGATGGCATTCTGGAGGCAAATGCTTTCATGATTGATGCAACTCAAGAGAAAGCTGAAGATATTTTGCCAGGGCGAGGTCTTCTCTCCAAGATGGGAAGGAGGTCATTAGCTCTTGATGAAGATCGCCGTGCATCTTATAATATGGCAAATCAACCAATTACACGATCAGATTCAATATTTATGACTTTTGAGAGTGAACCTAAGCATCTGGTTACTGTTGGACTTCATGCGGAGTATTCCTATGCTAGGAGTTTGGCTCGATTTAGTGCAAGTCTAGGACCTGTTGCTTGGAAAGTTGCTTCCCATAAGATTCAGCAGGCGCTGCCAGCTGGATGTAAATTTGGTCGTGGTTGGGTTGGAGAGTATGAACCTCTTCCAACCCCAGTATTAATGTTTGGCAATCGTATGCAAAAGGATGATAGTTTGGTTACGAGGTTGCATTGTAGTAGTGCATCTATAAAAGGTGACAAAAATTGTAGAAATGTGGAACCCACTATTGAGCATCATGGTGATCGGCAAGTTTTTCAGGGTAAGCAGATTCCAATTTGTCCTCCCAATGGGCTTGCATCAGAGGGAAAACCCTCATTGTTTGGTTCTGGTGGAATAAGACCCAATGCTCCTGTTGACCTCAATAATCAGCAGAAGAATGTTCCATCCAGGAATTTTGGTAAGTCTGAGAATCAGTTTTTGAAACAAGTGGAGTTGAACTCTGCACCTTCAATGAATGAAAATAATTCCAGTTCAGTTGCAAAGTTTCCAAGTAACGCTTCTCCAACTTTGTCTAAGCCCAGAGAAATGGTATCAAGGAACATGAATACCATTCCATCTGTATCATTCAAGCAGCCAGATACTAATGGAGTGGTTAGTGGAGAATTGCCAAATGGAAAAGTAATGAATCCTAATTCGAATAGACAGGTGACTTATCCATCATCTGAAAGTACATCAAACCAAGCAGGGAGAGCACCTCCTCTTGTCCATGGCAAGGAGCAGAGTGTCAGTGACCCAGTTCAGTTAATGAGAATGTTTGCCGAAAGGACTCAAAAACAGCAGGTTTCTAATCATTCCCCAGGTAATACTCCGCCAGTGACACCATCAGATCGATCTGTACAGAGAGATGACTCGGCCAATGCTTCAGCAGCAGCAGCAGCCGCTCGGGCATGGATGTCTGTAGGGGCAGGAGGGTTTAAACAAGTACCAGACAATTCGAGCTCACCCAAAAGTCAGATATCTGCATATTCATTGTACAATCCGACAAGAGAGCTGCATCAGCATATGTCCCAAATTCGGGGGAACTTTCCTCCTGGAGCAGCACCTTTCCAATCTGACAAGAACAATTTTCCATTCCAGGCATTTGTACCGCAAGCTGCTATTTCACCGTTTCCAAACAGACCTATGGTTATCCCTCAGTTAGCATCAGCTGATCTATCTAGATTTCAAATGCAGTCCCATTGGAGAGGTCCAAGCCCTCCTAGCCAACCAAGACAAAAACAGGAAACACTTCCTCCTGACTTGAATATTGGCTTCCAATCTCCGGGATCACCTGCGAAGCAGTCTTCAGGGGTCATTGACTCGCAGCAACCAGACCTAGCTTTGCAGCTATGA 2208 0.4443 MVKGRKVDLKGLHCASGTPTNPPSGIPLPDKRTLELILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYPTLEQFESDVFLICSNAMQYNAPETIYHKQARSIQEQGRKKFEKLRIDFERSQAELKLEQKTRAISLVKKQGKKPLGRASQEPIGSDFSSGATLATINDVQPTSFPMQGGSCERPGLIDGILEANAFMIDATQEKAEDILPGRGLLSKMGRRSLALDEDRRASYNMANQPITRSDSIFMTFESEPKHLVTVGLHAEYSYARSLARFSASLGPVAWKVASHKIQQALPAGCKFGRGWVGEYEPLPTPVLMFGNRMQKDDSLVTRLHCSSASIKGDKNCRNVEPTIEHHGDRQVFQGKQIPICPPNGLASEGKPSLFGSGGIRPNAPVDLNNQQKNVPSRNFGKSENQFLKQVELNSAPSMNENNSSSVAKFPSNASPTLSKPREMVSRNMNTIPSVSFKQPDTNGVVSGELPNGKVMNPNSNRQVTYPSSESTSNQAGRAPPLVHGKEQSVSDPVQLMRMFAERTQKQQVSNHSPGNTPPVTPSDRSVQRDDSANASAAAAAARAWMSVGAGGFKQVPDNSSSPKSQISAYSLYNPTRELHQHMSQIRGNFPPGAAPFQSDKNNFPFQAFVPQAAISPFPNRPMVIPQLASADLSRFQMQSHWRGPSPPSQPRQKQETLPPDLNIGFQSPGSPAKQSSGVIDSQQPDLALQL 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00691 735 MobiDBLite consensus disorder prediction 548 582 - -
Aip01g00691 735 MobiDBLite consensus disorder prediction 548 577 - -
Aip01g00691 735 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 10 735 - -
Aip01g00691 735 MobiDBLite consensus disorder prediction 497 522 - -
Aip01g00691 735 Gene3D - 29 149 IPR036427 GO:0005515
Aip01g00691 735 PRINTS Bromodomain signature 75 93 IPR001487 GO:0005515
Aip01g00691 735 PRINTS Bromodomain signature 59 75 IPR001487 GO:0005515
Aip01g00691 735 PRINTS Bromodomain signature 93 112 IPR001487 GO:0005515
Aip01g00691 735 PRINTS Bromodomain signature 45 58 IPR001487 GO:0005515
Aip01g00691 735 ProSitePatterns Bromodomain signature. 48 104 IPR018359 -
Aip01g00691 735 CDD Bromodomain 30 126 - -
Aip01g00691 735 PANTHER BROMODOMAIN CONTAINING PROTEIN 10 735 - -
Aip01g00691 735 MobiDBLite consensus disorder prediction 441 534 - -
Aip01g00691 735 Pfam Bromodomain 36 116 IPR001487 GO:0005515
Aip01g00691 735 SMART bromo_6 23 131 IPR001487 GO:0005515
Aip01g00691 735 MobiDBLite consensus disorder prediction 680 735 - -
Aip01g00691 735 ProSiteProfiles Bromodomain profile. 42 112 IPR001487 GO:0005515
Aip01g00691 735 MobiDBLite consensus disorder prediction 441 490 - -
Aip01g00691 735 SUPERFAMILY Bromodomain 19 129 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00691 Aip-Chr1 11195660 11201767 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00691 K22184 - gmx:100799986 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00691 01 11195660 11201767 Aip01g00691 01 11195660 11201767 ECH