Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00658 ATGGCTGCTCCGGTAGTTGCGGAGGGCGCGGCCGTCTTGGCGTTCCGGTCGGTGATGCAGCGGGTCCGGCAAGCGGCTGATAGATCCGGCACCCTACCCGAATCAATCAGGGTCGTCGCCGTCTCCAAGACGAAGCCGGTTTCCATGATTCGGCAACTTTACGACGCAGGCCACCGCTGCTTCGGCGAGAACTATGTCCAAGAAATCGTCGACAAGGCTCCTCAGCTTCCACAAGACATTGAGTGGCATTTCATTGGGCATTTGCAAAGCAACAAAGTCAAAACGCTTTTGGGTGGAGTTCCAAATCTGGCCATGTTTGAGGGTGTCGACAATCAGAAGGTGGCAAATAATCTTGACCGTATGGTTTCAACCCTTGGAAGAAATCCGCTGAAAGTCTTGGTGCAAGTAAATACAAGTGGAGAAGAATCCAAATCTGGTATTGATCCTTCCAATTGTGTTGATCTTGCTAAACATGTAAAATCGAGTTGTCCGAACCTCGTGTTCTCCGGATTGATGACAATAGGGAGGCCTGACTACACCTCAACTCCAGAGAACTTTAAGACCCTATCCAATTGCAGAACTGAAGTTTGCAAGGCACTTGAGATGCCTGAGGAGCAATGTGAACTGTCAATGGGCATGTCCAGTGATTTTGAGTTAGCGATTGAAATGGGTAGTACAAATGTGAGAATTGGGTCCACAATATTTGGACCAAGGGATTATTCAAAGAAACAAGAATAG 738 0.4824 MAAPVVAEGAAVLAFRSVMQRVRQAADRSGTLPESIRVVAVSKTKPVSMIRQLYDAGHRCFGENYVQEIVDKAPQLPQDIEWHFIGHLQSNKVKTLLGGVPNLAMFEGVDNQKVANNLDRMVSTLGRNPLKVLVQVNTSGEESKSGIDPSNCVDLAKHVKSSCPNLVFSGLMTIGRPDYTSTPENFKTLSNCRTEVCKALEMPEEQCELSMGMSSDFELAIEMGSTNVRIGSTIFGPRDYSKKQE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00658 245 CDD PLPDE_III_YBL036c_euk 16 236 - -
Aip01g00658 245 Hamap Pyridoxal phosphate homeostasis protein. 13 237 IPR011078 GO:0030170
Aip01g00658 245 SUPERFAMILY PLP-binding barrel 15 236 IPR029066 -
Aip01g00658 245 ProSitePatterns Uncharacterized protein family UPF0001 signature. 82 96 IPR011078 GO:0030170
Aip01g00658 245 Pfam Alanine racemase, N-terminal domain 20 238 IPR001608 -
Aip01g00658 245 Gene3D Alanine racemase 9 245 IPR029066 -
Aip01g00658 245 PANTHER PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN 7 243 IPR011078 GO:0030170
Aip01g00658 245 TIGRFAM TIGR00044: pyridoxal phosphate enzyme, YggS family 18 238 IPR011078 GO:0030170
Aip01g00658 245 PIRSF YBL036c_PLPDEIII 3 244 IPR011078 GO:0030170
Aip01g00658 245 PANTHER PYRIDOXAL PHOSPHATE HOMEOSTASIS PROTEIN 7 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00658 Aip-Chr1 10359435 10363830 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00658 K06997 - gmx:100793309 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00658 01 10359435 10363830 Aip01g00658 01 10359435 10363830 ECH