Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00652 ATGTCGCTATACAGGGTCTTCTCTCGTTCTTCAAGGTCCTTGTGTCGAAGCTCTACGCTTCTCTATGCTTCCGCAAAGCCCCAATCCATGCCCACAACGCTCTCCAATCACTTTCATTCCCTCGTGCATCAATCGCCAAACAAGCTGATTCCAATTCAATCCAATTTATTGAACCTACCAATAAATTCATTTTCAAATCCAAGATTTGATTTTTCTTCATCGGCTTACCCTGAACCTGCAAGTGATGACCCTGCAAAGACAACTGAAGAAGCTAATGTAACTGATCACAGTAATCAAGCGAAATCTATGGATCAGACCAAAGAATCAGATATAGGGAGTGAATGTGACCTATCAAGGGATGATTTAATAAAGCTTGCAGCTGAGAAAGAAGGACTTTTGAAGGTAAAGCAAAAAGAGATTGAGAAAATGCAGGATAAAGTTCTCCGTACTTATGCCGAGATGGAGAATGTCATGGATAGGACTAGACGTGAAGCAGAGAATTCGAAAAAATTTGCTATACAGAATTTTGCGAAGAGTTTACTAGATGTTGCTGATAACTTGGGAAGAGCTTCCTCTGTTGTAAAGGAGAGTTTTTCAAAGATTGAAGCACCAAATGACTCTGTTGAAGCTGCACAACTTCTGAAAACACTTCTTGAGGGTGTTGAAATGACTGAAAAACAGCTTGTAGAGGTATTCAAGAAGTTTGGTGTAGAAAAATTTGATCCCACAAATGAGGCATTCAATCCTCACAGGCATAATGCCATCTTCCAGATGCCTGATGCTTCCAAGCCCCCAGGCACTGTTGGAGTTGTTCTGAAGGCAGGTTATATGCTTCATGAGCGAGTTCTTCGTCCGGCAGAAGTTGGTGTTACCCAACAAGCAGAGGATTAA 891 0.4153 MSLYRVFSRSSRSLCRSSTLLYASAKPQSMPTTLSNHFHSLVHQSPNKLIPIQSNLLNLPINSFSNPRFDFSSSAYPEPASDDPAKTTEEANVTDHSNQAKSMDQTKESDIGSECDLSRDDLIKLAAEKEGLLKVKQKEIEKMQDKVLRTYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIEAPNDSVEAAQLLKTLLEGVEMTEKQLVEVFKKFGVEKFDPTNEAFNPHRHNAIFQMPDASKPPGTVGVVLKAGYMLHERVLRPAEVGVTQQAED 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00652 296 Coils Coil 126 146 - -
Aip01g00652 296 Pfam GrpE 128 291 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aip01g00652 296 PANTHER GRPE PROTEIN 8 294 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aip01g00652 296 MobiDBLite consensus disorder prediction 72 113 - -
Aip01g00652 296 Gene3D Head domain of nucleotide exchange factor GrpE 236 291 IPR009012 GO:0006457
Aip01g00652 296 ProSitePatterns grpE protein signature. 247 290 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aip01g00652 296 Gene3D - 123 235 IPR013805 -
Aip01g00652 296 Hamap Protein GrpE [grpE]. 82 292 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aip01g00652 296 PANTHER GRPE PROTEIN HOMOLOG 8 294 - -
Aip01g00652 296 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 130 236 IPR013805 -
Aip01g00652 296 CDD GrpE 141 290 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aip01g00652 296 PRINTS GrpE protein signature 148 164 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aip01g00652 296 PRINTS GrpE protein signature 244 259 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aip01g00652 296 PRINTS GrpE protein signature 271 290 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Aip01g00652 296 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 237 292 IPR009012 GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00652 Aip-Chr1 10197230 10200459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00652 K03687 - gmx:100812682 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00652 01 10197230 10200459 Aip01g00652 01 10197230 10200459 ECH