Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00649 ATGGCAGTGACAGATTCACAAAATCCTCTTCTTGGAGAAGACACCTGTGGTTCCTTGTTAAATAAGCTGCAGGAAATATGGGATGAAGTTGGAGAGAGCGATGAGGAGCGAGACAAGATGCTTCTTCAAATAGAGCAAGAGTGCTTGGATGTGTACAAGAGAAAGGTTGAACAGGCTGCTAAGTCAAGGGCACGCCTTCTTCAATCTTTATCTGATGCTAAGATTGAGCTTTGTAATCTTCTATCGGCTCTTGGAGAGAAGGGCTTTGCTGGAATGCCGGAAAAAACTTCGGGCACTATCAAGGAACAGCTTGCAGCTATAGCACCAATACTTGAAAAGTTATGGCAACAAAAGGATGAAAGAGTAAAGGAGTTTTCGGATGTGCAGTCGCAGATTGAAAAGATATGTGGAGAGATTGCTGGCGACTTGAGCCCTAGTGATCAGACAGGACCGCCCGCAGTTGATGAGTCTAATCTGTCCTTGAAGAAATTAGATGAATTTCAATCCCAACTACAAGAACTTCAAAAGGAAAAGAGTGAGAGGTTGCACAAGGTTCACGAATTTGTGAGTACTGTGCATGATCTTTGTTCGGTCCTTGGTATGGATTTCTTGAGTACTGTGACTGAGGTTCATCCGAGCTTAGATGATTCTACCAGTGTTAACTCCAAAAGCATAAGCAACGGCACACTAGCTCGGTTGGCTAATACAGTATCAACACTGAATGAAGAAAAACAGAAAAGGCTACACAAGCTCCAAGAATTGGCTTCCCAGTTGGTTGATCTGTGGAATCTAATGGATACTCCTCCGGAGGAGAGAAGTCTATTTGACCATGTTACCTGCAATATGTCAACTTCTGTGGATGAAGTCACTGTTCCTGGTGCTCTTGCTTTGGATCTGATTGAGCAGGCTGAAGTGGAAGTAGAGAGGCTCGATCAGCTGAAAGCCAGCAGGATGAAAGAAATTGCTTTCAAGAAGCAAGCAGAACTTGAAGAGATATTTGCCCGTGCTCATATTGAAATAGAGCCAGAAGCTGCTCGAGAGAAGATTATGTCGCTGATTGATTCTGGAAACATCGAACCAACTGAATTGCTGGCTGACATGGACAATCAAATAGCAAAGGCGAAAGAAGAAGCTTTAAGCCGAAAAGAAATATTGGACAAGGTTGAGAAGTGGATGTCAGCATGTGAGGAAGAGAGCTGGCTTGAAGACTATAATCGGGATGATAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTGAAACGTGCAGAGAAAGCTAGGATACTAGTCAACAAAATTCCAGCTTTGGTTGACACATTGGTTGCTAGAACTCGAGCATGGGAAGAAGTTCATGACATGTCATTCGCATACGACGGTGTTCCTCTTCTTGCTATGTTAGATGAATACGCCATGCTCAGGCATGAAAGGGAAGAGGAAAAACGAAGGATGAGGGACCAAAAGAAGTATCATGAACAGCAAAACACAGAACAGGATTCTCCTTTTGGCACAAAACCCAGCCCTGCTCGGCCGGTTGGCAGCAAGAAGGTAGTTGGCCCTCGTGCTAACGGAGGAGCTAACGGCACTCCTAACCGACGACTCTCTCTGAATGCCCATCAGAATGGAAGCAAGTCTACATCAAAAGATGGGAAAAGGGATAGACAATCTGCTCCCCTGAACTATGTTTCCATATCAAAAGAAGATGCTGCTTCCCATGTTTCTGGTTCTGAACCAGTCCCCGCATCACCCTAA 1752 0.4452 MAVTDSQNPLLGEDTCGSLLNKLQEIWDEVGESDEERDKMLLQIEQECLDVYKRKVEQAAKSRARLLQSLSDAKIELCNLLSALGEKGFAGMPEKTSGTIKEQLAAIAPILEKLWQQKDERVKEFSDVQSQIEKICGEIAGDLSPSDQTGPPAVDESNLSLKKLDEFQSQLQELQKEKSERLHKVHEFVSTVHDLCSVLGMDFLSTVTEVHPSLDDSTSVNSKSISNGTLARLANTVSTLNEEKQKRLHKLQELASQLVDLWNLMDTPPEERSLFDHVTCNMSTSVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQAELEEIFARAHIEIEPEAAREKIMSLIDSGNIEPTELLADMDNQIAKAKEEALSRKEILDKVEKWMSACEEESWLEDYNRDDNRYNASRGAHLNLKRAEKARILVNKIPALVDTLVARTRAWEEVHDMSFAYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKYHEQQNTEQDSPFGTKPSPARPVGSKKVVGPRANGGANGTPNRRLSLNAHQNGSKSTSKDGKRDRQSAPLNYVSISKEDAASHVSGSEPVPASP 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00649 583 Coils Coil 157 184 - -
Aip01g00649 583 Coils Coil 463 483 - -
Aip01g00649 583 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 508 - -
Aip01g00649 583 Gene3D - 370 504 - -
Aip01g00649 583 MobiDBLite consensus disorder prediction 478 495 - -
Aip01g00649 583 MobiDBLite consensus disorder prediction 528 544 - -
Aip01g00649 583 Gene3D - 155 211 - -
Aip01g00649 583 Coils Coil 241 261 - -
Aip01g00649 583 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 583 IPR007145 GO:0000226|GO:0008017
Aip01g00649 583 MobiDBLite consensus disorder prediction 478 583 - -
Aip01g00649 583 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 5 583 - -
Aip01g00649 583 Coils Coil 300 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00649 Aip-Chr1 10129777 10134774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00649 13 510 EF-hand Containing Proteins AT5G62250 43.960 1.07e-125 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00649 K16732 - gmx:100806071 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00649 01 10129777 10134774 Aip01g00649 01 10129777 10134774 ECH
Aip01g00649 01 10129777 10134774 Aip07g00254 07 2152659 2155343 PCT