Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00648 ATGGACAAAAAGAATAAGAAAAAGAAGGTTCTTTGTAGGCTTGGTGTTAGACCCAACAATTCAAGGATGTCCCAAAAAAGTAGAAAAGGATCCTTGAGCCCGATCTCCTCAATCAATCAGTTCGGTGATGTTGAGTTAAGTCTAGAATCCAGATTAGGCTTGATAGAAATGGAGCACGATTTTCACGATAGGGATGGGCACGCTAGAGAAGGGTCTACGGCAAGAGGAAAGCTAAAGGCTGATCACGGCAGAGGAGGCTCAACGTGGCAAGGGAAATGCGCAATCCTGACGCCACCTATGTTGGGTCATGAGATCGAGGAAGAGTTGGTGGTAGAGAACCAAACTGCTACTCTCCCGGAGGTGACATTGAATGAAGGGACTGGTGGGTTGGGTGTATATGTTAATAACGATGGTGCGGAAGACGTTGACGAAGGAACAGGTAACAGAGATGACATTGTGAATGATAGTGGCATGGGTTCCAGTGCAAAGGGAACAACATTGACAAAGGGACTGGAGGAATTATCAGAATACGATGAAGTAGCTAAAAAGAGGGTTGTTGATGATGGTGGTTCGGACAAGATGAAGGAAATGTTGCCCGCTATGGGAGACAATGTTGTAGTGTCCACTATGGAGCTAGAGAAGTTGCTTAGCATGAAAGGAGGCAAAGGAGAAGCCAGCTATGTCAACAATTCCCAAGCACAGGCCATGCATGCGAAGTCAATGCTTCACCTTCTAAAAGAAACCCTAGACAGAGTTGAAGTAGAAGCATCAAGAGAGATGCCATTTGTGGTGGTGGATTTGGGTTGTTCATGTGGGATCAACACAATAAACGTTGTGGATGTGATGATAAAGCACATTATGAAGCGCTATGAGGGTTTGGGATTGGATCCACCCGAATTCTCAGCTTTCTTCTCAGATCTTCCTAGCAATGACTTCAACACTCTCTTTCAGCTCCTTCCACCCATGCCTAACTATGGAGTCAGCATGGAAGAGTGCCTCGCCGCCAAAAACCACCGTTCTTACTTTGCCGCCGGAGTCCCTGGTTCTTTCTACCGGAGGCTTTTTCCGGCCAGGTCCATCAATGTTTTCCACTCTGCCTTCTCTTTACATTGGTTATCTCAGGTGCCAGAAGCAGTAACGGAGAAGAGGTCAAGTGCATACAACAAAGGGAGAGTGTTCATCCATGGAGCCAATGAGATAACAGCCATTGCATACAAGAAACAGTTCCAAACAGACTTGGCAGCGTTCCTGAGGTCAAGATCTGTGGAGATGAAGAGAGGTGGGTCCATGTTCTTGGTTTGCTTGGGCAGAACATCTCTGGACCCCACCGACCAGGGTGGTGCTGGTCTCCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCTTCAGGGGTTAATTAGCAGTGAGAAACGTGACAGTTTCAACATTCCAGTTTATGCACCAAGCCTACAAGACTTCAAGGAGGTGGTTGAAGGCGACGGGTCATTCGCCATCCACAAGCTGGAGGTTTTCAAAGGAGGAAGCCCTCTTGTGGTTGACCAACCGGACAACGCCAGCCAAGTCGGAAAGGCCCTGGCCAACACCTGCCGGAGTGTCTCCGGCGTCCTTGTTGACGCCCACATCGGAGAAGACCTTAGCCACGAGCTCTTTCTTAGAGTGGAGCACAGAGCTACCTGCCATGGCAAAGACTTGTTAGAACAACTTCAGTTCTATCACATAGTTGCATCCCTTTCTTTTGTTCAATCATAA 1758 0.4778 MDKKNKKKKVLCRLGVRPNNSRMSQKSRKGSLSPISSINQFGDVELSLESRLGLIEMEHDFHDRDGHAREGSTARGKLKADHGRGGSTWQGKCAILTPPMLGHEIEEELVVENQTATLPEVTLNEGTGGLGVYVNNDGAEDVDEGTGNRDDIVNDSGMGSSAKGTTLTKGLEELSEYDEVAKKRVVDDGGSDKMKEMLPAMGDNVVVSTMELEKLLSMKGGKGEASYVNNSQAQAMHAKSMLHLLKETLDRVEVEASREMPFVVVDLGCSCGINTINVVDVMIKHIMKRYEGLGLDPPEFSAFFSDLPSNDFNTLFQLLPPMPNYGVSMEECLAAKNHRSYFAAGVPGSFYRRLFPARSINVFHSAFSLHWLSQVPEAVTEKRSSAYNKGRVFIHGANEITAIAYKKQFQTDLAAFLRSRSVEMKRGGSMFLVCLGRTSLDPTDQGGAGLLFGTHFQDAWDDLVLQGLISSEKRDSFNIPVYAPSLQDFKEVVEGDGSFAIHKLEVFKGGSPLVVDQPDNASQVGKALANTCRSVSGVLVDAHIGEDLSHELFLRVEHRATCHGKDLLEQLQFYHIVASLSFVQS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00648 585 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 207 582 - -
Aip01g00648 585 Pfam SAM dependent carboxyl methyltransferase 250 580 IPR005299 GO:0008168
Aip01g00648 585 MobiDBLite consensus disorder prediction 64 91 - -
Aip01g00648 585 Gene3D - 216 561 IPR042086 -
Aip01g00648 585 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 207 582 IPR005299 GO:0008168
Aip01g00648 585 MobiDBLite consensus disorder prediction 64 82 - -
Aip01g00648 585 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 210 581 IPR029063 -
Aip01g00648 585 Coils Coil 583 585 - -
Aip01g00648 585 Gene3D Vaccinia Virus protein VP39 230 510 IPR029063 -
Aip01g00648 585 MobiDBLite consensus disorder prediction 139 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00648 Aip-Chr1 10120480 10129294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00648 K18848 - gmx:100801476 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00648 01 10120480 10129294 Aip01g00648 01 10120480 10129294 ECH
Aip01g00648 01 10120480 10129294 Aip07g00249 07 2095713 2100472 PCT