Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00647 ATGGCACCCTTTATTCTTTTGGTGCTTGTATCCCTTCTATTTGTTCCAACAAGTTCTTATGTTCAACAAACTAAAGAGGGTTTCATCTCTGGAGTTATATCTGACAAGGGTCTTGATTTTGCAAAGGATATACTAATAGAACAAGGTATTGCCTCCATTGTTCAGCTTCAGCTGCCAGAGATTGAGAAATCTGTTCAAGTCCCTTTCATTGGAAATGCTAAAGTGATTCTTTCTGAGATCACGATCAAGGATATTCAAGTAAATTCATCTTCTGTTGTGAGTGGAGAGAGTGGAATCTTTCTAGTTGTTTCTGGTGCCACTGCGGATTTGGCTATGAAGTGGAGGTATTCATGTAGCAGTTGGTTAATCCCAATTGGGATTTCGGATAGTGGAAATGCAACTGTGAAGGTTAAAGGTATGCAAGTGGGGCTTACAGTAGATTTAAGGAATGAAGAAGGAACTCTTAAGTTGATTCTCTTAGATTATGGATGTTATGTTGGAGATTTGTCTATAAAGTTGGAAGGTGGAGCATCTTGGCTGTACCAAGTCTTAGTGGATGCTTTTCAAGGGAACATAGCATCTGCAGTTGAAGATGGCATTTCAGATAAAGTAAGTGAAGGCATAGGGAAGCTTGACACTTTATTGCAGTCTCTTCCAAAGCAAATCTCTGTGGACAACTTTGCGGAGCTAAATGTTTCTTTCGTTGGCAATCCTGTCCTGAGTAGTACTTCAATTGCGATTGCGATTAACGGCTTATTCACAGAGAGAAATGTCTTTTTAGTACCTCAACGTTACCGAAAAAGATTACAGGTTTCTTCTGCATGTGGTGGTTTACCAAAGATGATAAAGGTTTCAATCCATGAAAATGTGTTCAGATCTGCTTCTCTAGTTTACTTCAGGGAAGGTAGTATGCAAATGATTATTGATGAACTACCTAATCAAGCCATTTTGAACACTGCTGAATGGAGATTCATAGTTCCTCAACTATACAAAAAGTATCCGAATGACGACATGCAGCTTAATATATCTGCATCTTCTCCCCCAGTGATACTAGTGGATAACCAAGATATTCGTGCGTCTGTTTTAGTAGACATAACGATTGATGTTCTTGAAGCTGGTGAAGTCATACCTGTTGCCTGCATCTCAGTGGATATTAGTGCTTCGTGTTCTGTGGACATTATACGAAACAAAATCAATGGTAGGCTCAAATTGGAAGAGTTTTCTGCATACCTGAAATGGAGCAAAATAGGAAAATTGCACATAAGTCTGATTCAGTCATTAATATCAACGGCTCTGAAAACCGTTGTCATACCGTACCTTAACTTGGAACTGAAGAAAGGATTAGCACTGCCAACCATTGATGGTTTTGCCTTTCAGAATGCAAATATCTTGTACCTTCCTCCATGGATTGCAGTGTGTACTGATGTTTCTTACTTAGAAGACTACTATCTCACTCAGCATTCAGCTTATGTATCATAA 1479 0.3901 MAPFILLVLVSLLFVPTSSYVQQTKEGFISGVISDKGLDFAKDILIEQGIASIVQLQLPEIEKSVQVPFIGNAKVILSEITIKDIQVNSSSVVSGESGIFLVVSGATADLAMKWRYSCSSWLIPIGISDSGNATVKVKGMQVGLTVDLRNEEGTLKLILLDYGCYVGDLSIKLEGGASWLYQVLVDAFQGNIASAVEDGISDKVSEGIGKLDTLLQSLPKQISVDNFAELNVSFVGNPVLSSTSIAIAINGLFTERNVFLVPQRYRKRLQVSSACGGLPKMIKVSIHENVFRSASLVYFREGSMQMIIDELPNQAILNTAEWRFIVPQLYKKYPNDDMQLNISASSPPVILVDNQDIRASVLVDITIDVLEAGEVIPVACISVDISASCSVDIIRNKINGRLKLEEFSAYLKWSKIGKLHISLIQSLISTALKTVVIPYLNLELKKGLALPTIDGFAFQNANILYLPPWIAVCTDVSYLEDYYLTQHSAYVS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00647 492 SMART bpi2_2 276 474 IPR001124 GO:0008289
Aip01g00647 492 Gene3D - 32 463 - -
Aip01g00647 492 PANTHER OS06G0309200 PROTEIN 1 492 IPR045897 -
Aip01g00647 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 245 478 IPR017943 GO:0008289
Aip01g00647 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 241 IPR017943 GO:0008289
Aip01g00647 492 PIRSF Lipid_binding_protein 3 482 IPR030675 GO:0005615|GO:0008289
Aip01g00647 492 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 492 - -
Aip01g00647 492 Pfam LBP / BPI / CETP family, C-terminal domain 280 478 IPR001124 GO:0008289
Aip01g00647 492 Gene3D - 36 216 - -
Aip01g00647 492 Pfam LBP / BPI / CETP family, N-terminal domain 37 210 IPR017942 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00647 Aip-Chr1 10070646 10076859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00647 K05399 - gmx:100815362 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00647 01 10070646 10076859 Aip01g00647 01 10070646 10076859 ECH
Aip01g00647 01 10070646 10076859 Aip07g00247 07 2080448 2083337 PCT