Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00617 ATGTGGAAGCCACGCGCCGTTGATCACGCGCTCTCTCTGCTTCTCTTTTGCTCATTGTTTGCTCTGGCTTCTGCTCAGGGATCTAAAACAAACGCATGGAAGACACTCACCGGAAGTCCACCAGTGGTCATAGCACGTGGTGGTTTTTCGGGAGTGTTTCCTGATTCCAGCTATGCAGCCTATAGTCTGGTAGGACAAACATCCGGGAATAATTACATTGCATGGTGTGATGTTCAACTAACAAAAGATTCATTTGGGATTTGCATTCCGGATATCAAACTTGATAATGCTACAAACATTGCTCAAGCTTTTCAAAACAAAAGTCAAACCTACCTAGTTAACGGTGCACCAGTCCGTGGATACTTTTCTGTGGATTACAATCTCAAGGATCTTGCCAGTGTTTTTTTGGTTCAAGGAGTTTACTCCAGAACTAACGACTTTGATGGTAATCTGTTTTCTATTTTAACTGTCGACGAGTTAGTTAAAGAAACAAAGCCACCGGCCCTGTGGTTGAATATTCAGCATGATGCATTCTATACACAGCACAATTTGAGCATGAGAAACTTTGTACTTACTGTTTCTAAAAGAGTTATTGTCAGTTATATCTCATCACCTGAAGCTGGTTTTCTGAGAGGTATAGTTTCGCGCTTTAATGCAAAGACTACAAAACTGGTCTTCAGGTTTATGGATAAAGATGTTGTAGATCCATCGACCAATCAGACTTATGGTTCTTACTTAAAGAATCTAACATTTATCAAGACATTTGCTTCGGGAATTCTTGTTCCCAAGGATTACATATGGCCTGTAGACGGAAACCTTTATCTACAACCTCATACCTCTTTGGTTGCTGATGCACATAAAGCGGGGCTGGAAGTGTTTGCATCGAATTTTGTGAATGATGTTCCGTCTGCCTTTAATTACAGTTATGACCCTCTAGCAGAGTACCTCCAATTCATTGACAATGGAGACTTCTCTGTTGATGGTGTGTTGTCTGACTTCCCCATAACACCAGCTGAAGCTGTAGGCTGCTTTGCTCTCCTAGGCGCCAATGCTAAAAAGACAATTAACACCACAGTCATTTCAAAATGTGGAGCAAGCGGAGATTATCCCGGTTGCACCAACAAGGCATATGAAAAGGCTATATCGGATGGGGCAGATGTCATTGACTGTCCTGTTCAAATGTCAAAGGATGGAACACCGTTTTGCTTAAGCTCTGCTGATCTTATAGAGAGCACAACAGTCGCTCAAACACGGTTCGCTCGTCTTGCCAAGTCTATTCCAGAGATCAAATCTGGCAGTGGCATATTTACCTTTAGCTTGACATGGGAAGATATACAAACCTTGACCCCCTCAATATCAAGCCCTTATTCTAAATTCAAATTATTCCGGAACCCAAAATATGACAAGAGCAATATCAACTTTTTAAGTCTGTCAGATTTCTTGGACTTGGCCAGAAACAAGACTTCCCTATCGAGTGTCGTGATCATCATTGAGAATGCTGCCTATCTTGCAGAGAAAGAAGATTTGAGTGTGACTGATGCTGTCATGAACACTTTGAGCAAAGCTGGTTATGATAAAACTGGGGCCCCAAGGGTTATGATTCAGTCCACCAATAGTTCTGTACTAATGAAATTTAAAGGGAAAACAAATTATGAACGTGTCTACGAAATCGATGAGCTAGTTGGTGATGCTGTTGTTTCGGCAGTAAACGACATCAAAAGCTTTGCAAATTCTGTAGTTCTCCAGAAGAAATCTGTGTATCCTACCAATTCTGATCTCTTCCTTACTGTCTCTACGAATATTGTAACAACTCTCCATCATGCCAATCTCTCCGTCTATGCACAAACATTTAGCAATGAGTTCGTATCTCAGGCATGGGATTTCTTCTCGGATCCAACTGTGGAAATCAATACATTTGTTCAGGAAGGATTAGTTGATGGAGTCATCACAGATTTCCCAAAAACAGCTGACAGATACAGAAGAAACAAATGCTTGACTATGGGTGACAACATGCCTGTTTACATGCTACCTGTTCAAATAGGTGGTCTTCTACAAGCTGTTACCAAAGATTACTTGCCACCGGCTTCAGCTCCACTCCCTCCTCTGAAAGAATCTGAAGTGAAAGAACCACCTTTGCCTTCTGCTTCCCCATCACCAACACCATCTGGATCTTCTGCTGGAAACAATTCAGCAGCTCAGTCACCGAAAAATGCGCAGGTTAAGGTCACCATCTCCTTCCTTTTGTCCCCTTTGGCTGTGCTTGTAGCTTGTCTTCTGCTTTGA 2283 0.4205 MWKPRAVDHALSLLLFCSLFALASAQGSKTNAWKTLTGSPPVVIARGGFSGVFPDSSYAAYSLVGQTSGNNYIAWCDVQLTKDSFGICIPDIKLDNATNIAQAFQNKSQTYLVNGAPVRGYFSVDYNLKDLASVFLVQGVYSRTNDFDGNLFSILTVDELVKETKPPALWLNIQHDAFYTQHNLSMRNFVLTVSKRVIVSYISSPEAGFLRGIVSRFNAKTTKLVFRFMDKDVVDPSTNQTYGSYLKNLTFIKTFASGILVPKDYIWPVDGNLYLQPHTSLVADAHKAGLEVFASNFVNDVPSAFNYSYDPLAEYLQFIDNGDFSVDGVLSDFPITPAEAVGCFALLGANAKKTINTTVISKCGASGDYPGCTNKAYEKAISDGADVIDCPVQMSKDGTPFCLSSADLIESTTVAQTRFARLAKSIPEIKSGSGIFTFSLTWEDIQTLTPSISSPYSKFKLFRNPKYDKSNINFLSLSDFLDLARNKTSLSSVVIIIENAAYLAEKEDLSVTDAVMNTLSKAGYDKTGAPRVMIQSTNSSVLMKFKGKTNYERVYEIDELVGDAVVSAVNDIKSFANSVVLQKKSVYPTNSDLFLTVSTNIVTTLHHANLSVYAQTFSNEFVSQAWDFFSDPTVEINTFVQEGLVDGVITDFPKTADRYRRNKCLTMGDNMPVYMLPVQIGGLLQAVTKDYLPPASAPLPPLKESEVKEPPLPSASPSPTPSGSSAGNNSAAQSPKNAQVKVTISFLLSPLAVLVACLLL 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00617 760 SUPERFAMILY PLC-like phosphodiesterases 40 339 IPR017946 GO:0006629|GO:0008081
Aip01g00617 760 MobiDBLite consensus disorder prediction 698 718 - -
Aip01g00617 760 Gene3D Phosphatidylinositol (PI) phosphodiesterase 40 340 IPR017946 GO:0006629|GO:0008081
Aip01g00617 760 Gene3D Phosphatidylinositol (PI) phosphodiesterase 356 659 IPR017946 GO:0006629|GO:0008081
Aip01g00617 760 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 13 757 - -
Aip01g00617 760 CDD GDPD_SHV3_repeat_1 41 340 - -
Aip01g00617 760 Pfam Glycerophosphoryl diester phosphodiesterase family 364 655 IPR030395 GO:0006629|GO:0008081
Aip01g00617 760 Pfam Glycerophosphoryl diester phosphodiesterase family 76 335 IPR030395 GO:0006629|GO:0008081
Aip01g00617 760 CDD GDPD_SHV3_repeat_2 358 659 - -
Aip01g00617 760 MobiDBLite consensus disorder prediction 698 734 - -
Aip01g00617 760 ProSiteProfiles GP-PDE domain profile. 357 660 IPR030395 GO:0006629|GO:0008081
Aip01g00617 760 MobiDBLite consensus disorder prediction 719 734 - -
Aip01g00617 760 SUPERFAMILY PLC-like phosphodiesterases 358 660 IPR017946 GO:0006629|GO:0008081
Aip01g00617 760 ProSiteProfiles GP-PDE domain profile. 41 341 IPR030395 GO:0006629|GO:0008081
Aip01g00617 760 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 13 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00617 Aip-Chr1 9339183 9348098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00617 5 760 Receptor kinase-like Gene Family AT4G26690 53.080 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00617 - - gmx:100814941 982.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00617 01 9339183 9348098 Aip01g00617 01 9339183 9348098 ECH