Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00607 ATGAAGCAAAACAAGGTAGCAACAACAGAGAATGGTTTCTTGGGGAGCATTTCTTCCTCCTCAATCAGAAACCTCATCATTCCAAAATCATTCTCTTCCACTCGAAACAAATACACTTCACTTTCTTCCTCAAATTCAAATTCAAACCCTAAAGTCCCCAAATCCAACGCTGAAAACACTCCCCCAGCAGATCCAAACATCATCAACCATCAACAATCTCAGATCAAGGCTCCAATTTCTCACACCCAATTGAACGACGATCCTACAGTGAAGGTTGTGGTGCGAATTAGACCTGAGAATAAGAATAACAATGCGAAAGAAGGAGATTCGAAAATTGAGAAGGTTTCTTCTGATACATTGTGTTTGGGGGATGCACTATTCACCTTCGACGAGGTTTTTGATACCAACTCCAGCCAGGAGGATGTTTTCCAGTCTGTGGGTCTACCGTTGGTTAGAAGCGCTTTAGCTGGTTACAACACTTCAATTCTGACATATGGCCAGTCTGGAAGTGGAAAGACTTATACAATGTGGGGTCCCCCAAGTTCCATTGTTGAGGAGCCTTTGAGTCAAAGTCAACAGGGAATTGCTCCTCGGATCTTCAGAATGTTATTTACTGAGCTTGAAAGAGAGAAACGTATGTCAGATAGGAAACAGTTCAACTATCAATGTCGTTGTTCTTTTCTTGAGATTTGCCACGATCAAATTAAAAATTTACTCAATCCAATCCAGCAGAACCTTGAGGTGAAGGAAGATTCAAAAAATGCACTGTATATTGAGAATTTGATTGAGGAATATATCACAAGCTACGATGATGTAGCTCAAATCATGATCAAGGGCCTTTCAAACAGAAAATATGGAGGCTTTAAGTCTAATGGGTACAAATCACACATCATTTTCACCTTTGTAGTTGAGTCTTGGTGTAAGGGAATTTCAAAAAGCTCCAATGGCTTAAAAAGTAGTAAGATCAGCCTTATTGATCTTGCTGGGCTTGACAGGGATACAACTGATCATGCAGACCAATATCATATGGAAACCATAAATTTAAAGAAGTCATTATCTCAGCTTGGCCATTTTGTGGATGCTCTGATTAACGAACCTCAATTTGCAAAAGATGAAGCCAACCCACACAAGAAATCCTGTTTAACACATTTACTACGAGACTCACTTGGTGGAAATTCGAAGCTCTCAGTAATCTGTTCGATCTCCCCTGATAACAAGAGTAATAGTGAAACACTCAGCACACTCAGATTTGGACAACGAGTAAGATCCGTTAGAAATGAGCCAGTTATCAATGAAATAAAGGAGGCTGATGTTGATTTCAGTGATACAATCAAGAACTTGAAGGAAGAACTTATCAGGGCAAAGGATGATGGGGGTAAAAAGGGATCCTTCCAAGGGTGTAATGCACAGGAAAGTCTTAATCATTTGAGAATCAGCATAAACCGCTCATTGATCCTTTCTAACATAGAGAATGACACCAATGAGGTGGTAAATGTCAATGAGGATGACATAAGGCAATTGCAGCAGCAGATTGATGAATTGTACAGCTCATGTGAAGGGAGCCCTAAAGACATTTCTGTCACTGAAGATTGTGTCCAGTTTTCTTCTGTTGAAAATTGTGATGCAGACATGCTCAATGACGGGGACATTGTGATATCAGCAGATAACATTGATTGCATCGAAAACACTTCAGAAGGCATTAAATCAGTCCATTCGTGCAGTCCATCTCCAATACTTGATGGACCAAAGTTGTCTGATTCCCCAAAATTTAGCAATAACCTAAGGAAAAACGTGACTTTTGCATCAAGTAATCTTGGACGTTGGAACAATGTGGCAGAGAATTCAAATTTAGATGAAGATTTGTCAAGAAAATCATTTAAAGAGTGTCAGCATATGCAATCCTCTTTACGGTCTAGCAAGGCTGAATCGTTGGCAACAAGCCTCCAGAGGGGATTACAAATGATTGACAATCACCAGAAGAACTCAGCATTGAACAAATCCACAACCTCCTTCTCATTTGAGCACTTAACCTTGATGGCATGCCCAGAAAATGACCAGGCTGAATCTTCTGATCATACAATACCGAATAAGCCTTCCAGTGATGGAGAATACACCTCCCTTTGTGCATCTTGTCGAACAAAATTATGCGATAAGGATTATGCTGAGGTCCAAGATAGCTTGAAAGTCCCAAAACACTTGGATAATGTGTGCATGGAGCAAGCAGCTAGAATCAAGCAGCTAAATGAAATGGTGGAGAAATTGAAAGACGAAAACAAGATTCTGAAGGGGACATCCTCAATTGGTCATTTCCCATATATTACAGGGGAAGAATGTGAAATTAAAGAAGTACAGGAAGAGTGTGCTAAAAAAGATAGCTCTTTTGATGCTAATGAGAAGGAATTGCTTCTTGAAGAAATTAAGAATCTAAGGAGCAAGCTTCAATCATATGGTGATGCACCGGTTAAAAAGTCAACCGATATACTTAGATCTTCTTTAATGTCAAGATCCATACAACTGCAGAAGAGTGGTGTGTTTTCTCATGAAAATGATGGGGAAGAGCTAGAGAATGAAAAGCAGAGATGGACCGAAATGGAAAGTGAATGGATTTGTCTTACGGACGAACTTAGAGTTGATCTTGAGTCCCAGCGCCAGCATGCAGCGAGGGTGGAGGCAGAACTGAGATCTGAGAAGAAGTGCACAGCAGAGTTGGATGATGCACTAAATAGAGCAGTCACTGGTCATGCTAGAATTGTGGAGCACTACGCTGAGCTACAAGAGAAATATAATGACTTGGTTGTTAAGCATGAGGCAGTAATGGAAGGGATAGCAGAGGTGAAAAGGGCGGCAGCAAAGGCCTCAAAAAAGGGACATGCTCGCTTTGCCAAATCTCTTGCTGCCGAGCTTTCTGTCATGAGGGTGGAGAGGGAAAAGGAATCAAAATTGTTGAAAAGGGAGAACCAGATTTTGAAAAGTCAACTCCGAGATACTGCGGAAGCTGTTCAGGCAGCCGGAGAACTACTTGTTAGACTAAGAGAAGCTGAACATGCTGCATCTGTTGCAGAGGAAAACTTTGCAAACGTGCAACAAGACAATGAGATGTTAAAATTGCAAATTGAAAAGCTGAAAAGTAAACACAAGACAGAGGTTAGTACCATGAAGCAGTACCTTGCAGAGAGCAAATTACCAGAATCTGCACTGCAACCACTGTATCAAGAGGATTCTGAATTGGCACACAACAATGCCACTTCATATACTTATGATGATCAAGCATGGAGAGCAGAATTCGGAGCATCATATCATGATCATCATTACTACTAA 3318 0.4072 MKQNKVATTENGFLGSISSSSIRNLIIPKSFSSTRNKYTSLSSSNSNSNPKVPKSNAENTPPADPNIINHQQSQIKAPISHTQLNDDPTVKVVVRIRPENKNNNAKEGDSKIEKVSSDTLCLGDALFTFDEVFDTNSSQEDVFQSVGLPLVRSALAGYNTSILTYGQSGSGKTYTMWGPPSSIVEEPLSQSQQGIAPRIFRMLFTELEREKRMSDRKQFNYQCRCSFLEICHDQIKNLLNPIQQNLEVKEDSKNALYIENLIEEYITSYDDVAQIMIKGLSNRKYGGFKSNGYKSHIIFTFVVESWCKGISKSSNGLKSSKISLIDLAGLDRDTTDHADQYHMETINLKKSLSQLGHFVDALINEPQFAKDEANPHKKSCLTHLLRDSLGGNSKLSVICSISPDNKSNSETLSTLRFGQRVRSVRNEPVINEIKEADVDFSDTIKNLKEELIRAKDDGGKKGSFQGCNAQESLNHLRISINRSLILSNIENDTNEVVNVNEDDIRQLQQQIDELYSSCEGSPKDISVTEDCVQFSSVENCDADMLNDGDIVISADNIDCIENTSEGIKSVHSCSPSPILDGPKLSDSPKFSNNLRKNVTFASSNLGRWNNVAENSNLDEDLSRKSFKECQHMQSSLRSSKAESLATSLQRGLQMIDNHQKNSALNKSTTSFSFEHLTLMACPENDQAESSDHTIPNKPSSDGEYTSLCASCRTKLCDKDYAEVQDSLKVPKHLDNVCMEQAARIKQLNEMVEKLKDENKILKGTSSIGHFPYITGEECEIKEVQEECAKKDSSFDANEKELLLEEIKNLRSKLQSYGDAPVKKSTDILRSSLMSRSIQLQKSGVFSHENDGEELENEKQRWTEMESEWICLTDELRVDLESQRQHAARVEAELRSEKKCTAELDDALNRAVTGHARIVEHYAELQEKYNDLVVKHEAVMEGIAEVKRAAAKASKKGHARFAKSLAAELSVMRVEREKESKLLKRENQILKSQLRDTAEAVQAAGELLVRLREAEHAASVAEENFANVQQDNEMLKLQIEKLKSKHKTEVSTMKQYLAESKLPESALQPLYQEDSELAHNNATSYTYDDQAWRAEFGASYHDHHYY 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00607 1105 MobiDBLite consensus disorder prediction 684 703 - -
Aip01g00607 1105 PANTHER KINESIN-RELATED 48 1085 IPR027640 GO:0003777|GO:0007018
Aip01g00607 1105 SMART kinesin_4 87 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00607 1105 Pfam Kinesin motor domain 108 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00607 1105 PANTHER KINESIN MOTOR DOMAIN PROTEIN 48 1085 - -
Aip01g00607 1105 PRINTS Kinesin heavy chain signature 157 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00607 1105 PRINTS Kinesin heavy chain signature 286 303 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00607 1105 PRINTS Kinesin heavy chain signature 321 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00607 1105 PRINTS Kinesin heavy chain signature 374 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00607 1105 Coils Coil 497 517 - -
Aip01g00607 1105 Coils Coil 799 819 - -
Aip01g00607 1105 MobiDBLite consensus disorder prediction 36 68 - -
Aip01g00607 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 455 IPR027417 -
Aip01g00607 1105 Coils Coil 1010 1044 - -
Aip01g00607 1105 Coils Coil 737 764 - -
Aip01g00607 1105 Gene3D Kinesin motor domain 87 464 IPR036961 -
Aip01g00607 1105 ProSiteProfiles Kinesin motor domain profile. 89 424 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00607 Aip-Chr1 9219645 9226027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00607 24 471 Miscellaneous Gene Families AT4G39050 29.060 4.48e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00607 K10400 - gmx:100817066 1336.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00607 01 9219645 9226027 Aip01g00607 01 9219645 9226027 ECH
Aip01g00607 01 9219645 9226027 Aip07g00233 07 2007929 2013935 PCT