Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00604 ATGGCTTCAAACCAGAACATGAAAGAGCTACAATGGGCACTTCAATCACTAAAATCCGAGTCCCTAAATCTTGAATGTGTTTCCTTCTATCTTTCCCAACCAACCTCAAACTGTTACCAAGAAACAGAAGCCTCCATAAACATAAACATCTCCAAAGAGAATCTCCCATTGTTCTCTCAAATCTTGACAACACTGGCTGAATCCAGAAGGACCAAATGCACATTGAGGAACCTTGAGTTTCATTCAGTTGTGTGGGAGACAGAAGAGGTAAGAAAACTTGGAACCCTTTTTGGGAACAGTGACAATAATCAAAGCATAAAGCAAGTTTTGTTTAGAAGAAACAGGTTCAATGGGAAAAGCCTCTCAGAGCTTTGTGATATTCTGAAGACAAATAGGGTGATCAAAGAGATTACGTTTTCGGAATCTGGGATTGGAGCAGTTGGAGCTGGACTAATTGCTTCTGCTCTCATGGTGAATCATAGTTTGGAGGAGCTTCAGATTTGGGATGATTCAATTGGTTCAAGGGGTGCTGAAGAGCTTTCAAAGATGATTGAAGTCAATCCAACTCTGAAATTGTTGACCATTTTCGACTCGAATGCCATCACTGCTACTCCTCTTATATCAGCTGTTTTGGCAAGGAACAGAACAATGGAGGTTCATGTTTGGAGTGGTGAAAAGGGGGAAAGAAGTTCAAAGGTTGTTGAGTTTGTTCCTGAGAATAGTACTCTAAGAATTTACAAGCTTAATCTCTCTGGCACTTGCCGCGTCGCCTGCGCCTTAGGAATGAACCTGACAGTGAAATCACTCGATATGACCGGAGTCCGGCTTAAGTCTCGGTGTGCTAAGGAGTTAAGGTGGGTTTTGGAACAAAACCAGACACTTAAAGAGCTCAATTTATCAAGAACTTGTCTTAAAAACAAGGGCATTGTGTATGTTGCGGCTGGACTCTTCAAGAACCGGAGTTTGCAGACATTGCATCTAACAGGAAATTGGTTCGGCGGAGTAGGCGTGGAGCATCTGCTCTGCCCTTTGAGTAGATTTTCAGCCCTGCAAAGGCAAGCCAACATTACTTTGAAGTGTGTTACTTTTGGAGGTGGCAGAACAAAAATAGGTAGGGAAGGTTTAGCCGCTATAACAAAGATGCTAACAACAAACGAGACTCTCCGGCAGCTCGGGATTCATGAGGATGAGAGTTTGAGACCAGATGACTTTGTCAAAATCTTCAAGAGTTTGGAGAAGAATGCTAGTTTGAAACTCTTGTCTCTACAAGGCTGCAAAGGTGTTCAAGGAGAGACATTGCTGCAAACAATGATGGAGACACTACAGATAAATCCTTGGATTGAAGACATTGATCTCTCAAGAACACCTTTGCATAATTCTGGAAAGACTCAAGGAATTTATCAAAGATTGGGGCAGAATGAGAAGACTGAACCAGAAATGGATTTGCTCAACAGCATGCCGCTAACACAGCCCAAGAGTTGCAGAGTCTTCTTTTGTGGGCAAGAATCTGCAGGTAAGGCAACACTTTGTAATTCAATATCTCATAATTTCTCTGCTTCGGCATTAACCTACTTGGATCAAGTCAGAACAATAGTAAACCCAGTGGAGCAGGCTGTCAAACCAGCAGGGATGAAGATAAAAACTTTCAAGGATGAGGACACAAAGATTTCAGTATGGAATCTTGCCGGGCAGCATGAGTTTTTCTCCCTCCATGATCTTATGTTCCCAGGGCATGGTAGTGCATCATTTTTCCTTGTAATATCTAGTTTATTTAGGAAACCGGGTAACAAAGAACCAAAAAGCATAACAGAGATTGAAGAAGATCTGCAGTATTGGCTAAGGTTCATAGTTTCCAACTCAAAAAGAGCAGTACAACAATGCATGCTACCGAGTGTTGCTGTTGTTCTCACACACTTTGATAAGATCAATCAACCGTCACATAATTTGCAGCATACTGTCAATTCAATTCAGAGACTGAGAGACAAGTTCCATGGCTTTGTTGATTTCTATCCAACAATATTCACAGTTGATGCAAGATCTTCTGCATCTGTTAGTAAACTCACTCATTACATCAGAAAGACAAGCAAGACTATTCTAGAAAGGGTGCCGCGAGTTTATCAACTTTGCAATGATCTGATACAGATTTTATCAGACTGGAGAACTGAGAATTACAACAAGCCAGCAATGAAGTGGAAGGAATTTGGCGAGCTATGCCAAGCGAAAGTGCCGGCTTTGAGAATCCGGTCTAGAAATGATAACAAAGGGAAAGTGGAAATAAGGAGAAGAGCTATTGCTACTTGCCTTCATCACATTGGTGAGGTGATTTATTTTGAAGAGTTGGGGTTTCTAATATTAGATTGTGAGTGGTTTTGTGGCGAAGCACTTGGTCAGCTTGTAAAGTTAAATGTGAGGAAGCAATACTCCTCAGAAAACAATGGATTTATTAGCAGGAAGGAGCTGGAGAAAATCTTAAGAGGAAGTTTGCAGAGCCCCATTCCTGGTATGGGTTCAAAGGTATCTGAGAACTTAGAGGCTAGTGATCTTGTGAGAATGATGCTGAAACTCGAGTTGTGCTATGAACAAGATCCATCAGATCCAAATTCTCTGCTATTGTTTCCCTCCATTCTTGAAGAAGGAAGAGGGAAGACTCCGAGGTGGCAGCTAAGCACACTGGACTGCCTGTACGCAGGACGTCATCTTGAGTGTGACGATTCTAGTCACATGTTTCTAACTCCAGGATTCTTCCCTCGTTTGCAGGTGCACCTTCACAACAGAGTAAAGACTCTAAATAATCAACATGGAGCAACTTATAGCCTTGAGAAGCACCTCATCTCAATCATCATCAATGGAATTTACATAAGAGTAGAGCTTGGAGGACAATTGGGTTATTATATTGACATCCTTGCATGCTCCACCAAAAACTTGACAGAAACTTTAAGAGTCATTCAGCAGCTTATAATTCCAGCAATCCAAAGCCTTTGCCATGGGATCACCTTGACCGAAAGCATCATAAGGCCCGAATGTGTCCGAAACTTGACACCCCCTAGATACAGAAAAACACAATCTGCTTCCGTGCAGCTACTTAAACAAGCGCTTCTGTCTCTTTCTGCAGACAGCATGTATGATTATCAGCACACATGGAGTCCAGTCTTAGATTCTGGTAGGCCAATCCTCCAAGCTGGGTTTGATTTAGCACGAGACCTTTTATCGGATGATGACTTTCGAGAAGTGTTGCATCGGAGATATCATGATTTATATGACCTCGCTCAAGAATTGCAAGTACCACCTGAAAATAACCCAGAAGGACAAGATCAATCTTTGGCTTTGAGCAATCAAGCTGAAACAGTTGATCCAAGCTTTGGGGGAATTGCAAAAGGAGTTGAAGCAGTCTTACACAGGCTAAAGATTATTGAACAAGAAATCAGAGACTTGAAGCAGGAAATCCAGGGGCTGAGATATTATGAGCATAGGCTCCTCCTCGAACTTCATCGCAAAGTGAACTACCTAGCAACCTACAATGTGCAGGTTGAGGAGAGGAAAGTTCCAAACCTGTTCTATTTTGTTCAAACAGAAAACTATTCTAGAAGGTTGATCACTACCATGCTTTCTGGCATGACCGCACTACGGCTTCACATGTTATGTGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAGATGGGTTGCGAGATCATGCAAGTTGATAACAGGGCTGTGCAATGTTTGGCTCCATATATGAAGAAATTCATGAAGTTGGTAACTTTAGCGCTAAAGATAGGTGCGCATCTTGCGGCCGGAATGGGAGAAATGATACCGGACTTGAGCAAGGAAATGGCTCATTTGGCCGGCTCTTCAGCTTTTGTTGGGGCAGCTGCAGCTGGTGCTGTAGGGGCAGCTGTTCTCGGCCGTAGAAATAGGGCTGCAGAAGGCTCAAGGGACATTCAACAAGATTTAAGAGCAGCACAACAATGGGTGGTTGATTTCTTAAGGGAGAGGAGGTGCTCCACAGGGAAGGACATTGCAGAGAAGTTTGGACTATGGCGAGTTCGGTACAGGGATAATGGTCAGATTGCTTGGATCTGTAGGAGGCACATGTATGCAAGATCTGCAGAGATAGTTGAAGTGCCTGTTTGA 4134 0.4279 MASNQNMKELQWALQSLKSESLNLECVSFYLSQPTSNCYQETEASININISKENLPLFSQILTTLAESRRTKCTLRNLEFHSVVWETEEVRKLGTLFGNSDNNQSIKQVLFRRNRFNGKSLSELCDILKTNRVIKEITFSESGIGAVGAGLIASALMVNHSLEELQIWDDSIGSRGAEELSKMIEVNPTLKLLTIFDSNAITATPLISAVLARNRTMEVHVWSGEKGERSSKVVEFVPENSTLRIYKLNLSGTCRVACALGMNLTVKSLDMTGVRLKSRCAKELRWVLEQNQTLKELNLSRTCLKNKGIVYVAAGLFKNRSLQTLHLTGNWFGGVGVEHLLCPLSRFSALQRQANITLKCVTFGGGRTKIGREGLAAITKMLTTNETLRQLGIHEDESLRPDDFVKIFKSLEKNASLKLLSLQGCKGVQGETLLQTMMETLQINPWIEDIDLSRTPLHNSGKTQGIYQRLGQNEKTEPEMDLLNSMPLTQPKSCRVFFCGQESAGKATLCNSISHNFSASALTYLDQVRTIVNPVEQAVKPAGMKIKTFKDEDTKISVWNLAGQHEFFSLHDLMFPGHGSASFFLVISSLFRKPGNKEPKSITEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKINQPSHNLQHTVNSIQRLRDKFHGFVDFYPTIFTVDARSSASVSKLTHYIRKTSKTILERVPRVYQLCNDLIQILSDWRTENYNKPAMKWKEFGELCQAKVPALRIRSRNDNKGKVEIRRRAIATCLHHIGEVIYFEELGFLILDCEWFCGEALGQLVKLNVRKQYSSENNGFISRKELEKILRGSLQSPIPGMGSKVSENLEASDLVRMMLKLELCYEQDPSDPNSLLLFPSILEEGRGKTPRWQLSTLDCLYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRVKTLNNQHGATYSLEKHLISIIINGIYIRVELGGQLGYYIDILACSTKNLTETLRVIQQLIIPAIQSLCHGITLTESIIRPECVRNLTPPRYRKTQSASVQLLKQALLSLSADSMYDYQHTWSPVLDSGRPILQAGFDLARDLLSDDDFREVLHRRYHDLYDLAQELQVPPENNPEGQDQSLALSNQAETVDPSFGGIAKGVEAVLHRLKIIEQEIRDLKQEIQGLRYYEHRLLLELHRKVNYLATYNVQVEERKVPNLFYFVQTENYSRRLITTMLSGMTALRLHMLCEFRGQMHVVEDQMGCEIMQVDNRAVQCLAPYMKKFMKLVTLALKIGAHLAAGMGEMIPDLSKEMAHLAGSSAFVGAAAAGAVGAAVLGRRNRAAEGSRDIQQDLRAAQQWVVDFLRERRCSTGKDIAEKFGLWRVRYRDNGQIAWICRRHMYARSAEIVEVPV 1377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00604 1377 Pfam C-terminal of Roc, COR, domain 760 927 IPR032171 -
Aip01g00604 1377 Gene3D Ribonuclease Inhibitor 227 350 IPR032675 -
Aip01g00604 1377 SMART LRR_RI_2 291 318 - -
Aip01g00604 1377 SMART LRR_RI_2 319 346 - -
Aip01g00604 1377 SMART LRR_RI_2 131 158 - -
Aip01g00604 1377 SMART LRR_RI_2 159 186 - -
Aip01g00604 1377 Pfam Leucine Rich repeat 290 311 IPR001611 GO:0005515
Aip01g00604 1377 Pfam Leucine Rich repeat 318 340 IPR001611 GO:0005515
Aip01g00604 1377 Gene3D Ribonuclease Inhibitor 351 481 IPR032675 -
Aip01g00604 1377 PANTHER PROTEIN TORNADO 1 1 1366 - -
Aip01g00604 1377 SUPERFAMILY RNI-like 56 473 - -
Aip01g00604 1377 Gene3D Ribonuclease Inhibitor 2 221 IPR032675 -
Aip01g00604 1377 Gene3D - 493 697 IPR027417 -
Aip01g00604 1377 Coils Coil 1127 1154 - -
Aip01g00604 1377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 480 685 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00604 - - gmx:100817598 2343.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00604 01 9132025 9138272 Aip01g00604 01 9132025 9138272 ECH