Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00541 ATGTCTCTCAGCATTCTCCGATCGCGATCCATTTCCATCGCAGCCACCCGCCTCCTCTGCACAGCCAGTTCTGCCCCCGCTTCCGCTTCGGAGTCGGCTCCGCCACCGGAGGCCGAGCCACGCCGCCCCGGTGGCTTCCTCAAGTTCGCCGTCGGAAGCATACTCACCGGTGCCATCGCCACTGCCGGTTACGCATCTTACGCTTACAGTTTGAATGAGATAGAAGAAAAAACTAAGTCTTTCCGTGAGTCAGTGAAGAAGAGTCCAGGTGATGGAGCTACTTCACTTGATAAATTTCAAGGGTTGCTATACTCTGCAGCAATGACAGTGCCTGTTAAAGCGATAGAGCTCTATTTGGATACAAGAAAGTTAGTTGAAGAACAAGTTCGGAGCTACACGGAGCCACATGCAGAGAAGCTTCTTCCAGATTTGTTACCTCCCGAGCAACATGCGTTTACACTTGTTCTGGATCTCAATGAGACATTGATTCATTATATATGGACGCGAGAGACAGGCTGGCAGACATTTAAGAGACCTGGTGTTGATGCATTCTTGGAACATCTTGCTCACTATTATGAAATTGTCGTCTACAGCGATGAACAAAATATGTTTGTTGACACTGTCATGGAAAGGCTGGATACCAACCATTATGTACGATATAGGCTAGCAAGGACAGCTACAAAGTATCAAGATGGGAAACATTTCAGAGATCTTTCAAAATTAAACAGGGATCCTGCAAAAGTTCTCTATTTAAGTGGCCATGCTTTCGAAAGTTGCCTTCAACCTGAGAACTGTGTCCCAATTAAGCCATGGCAGCAGACCGATAAAGATGATACAGCTCTGTTGGATTTTATACCATTTCTTGAGTTTGTTGCCCGTAGTAGTCCAGCTGATATAAGGCAAGTGCTAGCATCTTATCAGGGATGTGATATTCCAGCTGAATTCATTAGACGTTCCAAAGATCACCAAAGGAAAATGCAAGAGCAGAAAGGTCGAGGTCGCTTCTGGAAAAATTGA 1017 0.4592 MSLSILRSRSISIAATRLLCTASSAPASASESAPPPEAEPRRPGGFLKFAVGSILTGAIATAGYASYAYSLNEIEEKTKSFRESVKKSPGDGATSLDKFQGLLYSAAMTVPVKAIELYLDTRKLVEEQVRSYTEPHAEKLLPDLLPPEQHAFTLVLDLNETLIHYIWTRETGWQTFKRPGVDAFLEHLAHYYEIVVYSDEQNMFVDTVMERLDTNHYVRYRLARTATKYQDGKHFRDLSKLNRDPAKVLYLSGHAFESCLQPENCVPIKPWQQTDKDDTALLDFIPFLEFVARSSPADIRQVLASYQGCDIPAEFIRRSKDHQRKMQEQKGRGRFWKN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00541 338 Pfam NLI interacting factor-like phosphatase 153 300 IPR004274 -
Aip01g00541 338 SUPERFAMILY HAD-like 140 304 IPR036412 -
Aip01g00541 338 SMART forpap2 150 278 IPR004274 -
Aip01g00541 338 Gene3D - 137 321 IPR023214 -
Aip01g00541 338 PANTHER OS05G0513200 PROTEIN 20 329 - -
Aip01g00541 338 CDD HAD_FCP1-like 152 268 - -
Aip01g00541 338 ProSiteProfiles FCP1 homology domain profile. 147 291 IPR004274 -
Aip01g00541 338 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 20 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00541 Aip-Chr1 8011441 8017813 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00541 K17496 - gmx:100803155 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00541 01 8011441 8017813 Aip01g00541 01 8011441 8017813 ECH