Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00538 ATGGGTGAGGAAGAACCTGTGACTGAAGTTTCCAAAGCAGATTCAAATGGCAAGAGTTTGTTGGAGAAAACTTTAAATGAAGGGGCAGAAAATAAGGACTTGGGAACTGATGGAGGAAATGTCTTGGAGAATAATGGAGTAAAAAAGTTGAAAGGGGCTGAAATAAATGGAGCTAATGAAGAGAAGAGAGCTGATGGTGTGGAAGAGATTGAAGGAGATAAAAAAGTTGGTAGTGCAGAAGAAGCAAAAGATGACAAGAAAATTGAAGAAGCAAAGGATGACAAGAAAGTTGAAGATGTGAAAGAAGTAAAAAAGGACAAGAAAGATGATGATGTGGAAGAAGAAAACGAGGACAAGAAAGATGATGGTGCAGAAGTCAAAGAGGATAAGGAAGTTAACAGTGTCGAAGAAGTAAAGGAAAATAAGGAAGTTGTTAGTGTGGAAGAAGGAAAGGAGGATAAGGAAATTGATGGTGTGAAAGAAGTATCAGAGGTTAAGAAAGATGATGATGGACTTAAACCTGAGAATGAGAAAACAGATGCAGATGAGGTCAAGGAAAGTAAAGAAGAAAAGGAAAAGGTTGAAGCTGAAAAACCAGAAGTGGATGCAATGGAAGTAGATGGTAACACTAAAGACATGCAGGAGAGTGGGGAAAAGAAAGACAAGGAGAAAATCGAAGCAGAGCTGGACGGCAACAAGGAAGAGGAGGATGAGGATGTGGATAATGCTGGAAAGTCAAAAGAAGAAGACAAAGCTGAAGATAACAAGGATAATAAAGGATCGAAAAAGCGTTCGAGAGGGAAGGTCAATGGGGAGAAAGTGAAAGAGAAAAAGAAGGAATTGACGAAGATAGAGCCAAGGACTCCAACTGTTGATCGTCCTGTTCGAGAGAGGAAATCTGTTGAGAGGTTGGTAGCATCAATAGAGAAAGATGCAAACAAAGAATTCCACATCGAAAAGGGTCGTGGCACACCTTTAAAAGATATACCCAATGTGGCATTTAAATTATCTAGAAGGAAGACTGATGATACTTTCAAGTTGCTCCATACAATTCTCTTTGGAAGGAGAGGGAAGGTATGTTCTGCTTCATCAACTATCTTTGCTTTTCTGTTTTCTGGTTTTGTGTGGCATGACAATGAGGAAAAGCATATGATCAAAGTTAAGGAAAAATTTGACAAGTGTAACAAAGAAAAACTACTGGAATTCTGTGATGTGCTTGACATAGCAATTGCCAAGGCAACAACAAGGAAGGAAGATATTATTTCCAAGTTGATTGACTTCTTAGTTGCTCCTCATGCAACCACAACTGTGCTACTTGCAGAAAAAGAAAAGGGTTCATGTTATTTAAAGCGCAAGCGTGTTGTGAAACGAGGTACTTCAAGGTCTGGGATAACAACTTCAAGACGTTCTACTAAGAGTCGGAAGAAAAATGAAGATTCTTCACCAGCAGAGGAAACAAGGAGTGACACAGAAAATGAGTCTGAGGATGAAGAGAAAGACAAAGAAAATGAGGAGGAGAATGAAAATGGTGTTCATGACAAATCTGAGGATGAAACGCCAGAGAAATCTGAAAGTGAGGATGAAAGTGATTCTGCAAGTGAATCTGAAGATGATAAAAAAAGGAAACAAAATTCAAAAGCGTCATCCACAAAGAAAGAATCTGCTACAAAAAGTAAAGCTGAGAGTGTTACAGTTACCAAAAAATCTCGGTCAACGCCAAAGAGGACACCTAAGAAATCATCAGCCACCACTACCAAGGTTGATGATGAGGGCGAAGAAAGTCCAAAGGTCTTTTCAAGAAAGAAGCAAAATGATAAGGCTGGAAAGCAGAAGACATCAACTCCATCCAAGTTTGCTTCCAAAGAGAAAACAGAAAAAGTTACCAAAGGAAAGGGCAAGAAGAATCAGAAAAAGATCCCCACTGATGATCAGCTGCGCAATTCAATTTGTGAAATTCTTAAAGAAGTTGATTTCAATACGGTATGCTGTCAGGACTAA 1998 0.3904 MGEEEPVTEVSKADSNGKSLLEKTLNEGAENKDLGTDGGNVLENNGVKKLKGAEINGANEEKRADGVEEIEGDKKVGSAEEAKDDKKIEEAKDDKKVEDVKEVKKDKKDDDVEEENEDKKDDGAEVKEDKEVNSVEEVKENKEVVSVEEGKEDKEIDGVKEVSEVKKDDDGLKPENEKTDADEVKESKEEKEKVEAEKPEVDAMEVDGNTKDMQESGEKKDKEKIEAELDGNKEEEDEDVDNAGKSKEEDKAEDNKDNKGSKKRSRGKVNGEKVKEKKKELTKIEPRTPTVDRPVRERKSVERLVASIEKDANKEFHIEKGRGTPLKDIPNVAFKLSRRKTDDTFKLLHTILFGRRGKVCSASSTIFAFLFSGFVWHDNEEKHMIKVKEKFDKCNKEKLLEFCDVLDIAIAKATTRKEDIISKLIDFLVAPHATTTVLLAEKEKGSCYLKRKRVVKRGTSRSGITTSRRSTKSRKKNEDSSPAEETRSDTENESEDEEKDKENEEENENGVHDKSEDETPEKSESEDESDSASESEDDKKRKQNSKASSTKKESATKSKAESVTVTKKSRSTPKRTPKKSSATTTKVDDEGEESPKVFSRKKQNDKAGKQKTSTPSKFASKEKTEKVTKGKGKKNQKKIPTDDQLRNSICEILKEVDFNTVCCQD 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00538 665 MobiDBLite consensus disorder prediction 54 229 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 559 580 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 581 608 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 471 488 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 534 558 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 458 645 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 238 283 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 505 519 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 616 641 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 1 283 - -
Aip01g00538 665 PANTHER DEK PROTEIN 175 661 IPR044198 GO:0003677|GO:0006325
Aip01g00538 665 PANTHER PROTEIN DEK 175 661 - -
Aip01g00538 665 Coils Coil 177 197 - -
Aip01g00538 665 MobiDBLite consensus disorder prediction 489 504 - -
Aip01g00538 665 SUPERFAMILY DEK C-terminal domain 634 663 - -
Aip01g00538 665 Coils Coil 487 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00538 Aip-Chr1 7928399 7933865 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00538 K17046 - gmx:100818537 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00538 01 7928399 7933865 Aip01g00538 01 7928399 7933865 ECH