Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00531 atgaaaaaagTAGTCCTCATTTCTCTCTCTCACCCATTTTTTCCTTCTCCTTTCTCCTTATCAAGTATAGTACAAAGCTCCATGTCTGTCTCAACTATTCCAGCACCAAAATTAGGGGAGAGATTGTGTGAAAATGGATTTGAACATCCCAAAATTCTTCCTGCCATTGATGATGCCCATGGAGGAGTTATTGTTGACTTGAATGAACCTATGGATCCAGAACATTTTGCTACATTGCTTAGGTCTTCACTTCTACATTGGAACCTTAAGGGAAAACATGGTGTTTGGATAAAGTTACCTATCAGTCTTGTTAACCTTGTGGAAACTGCAGTGAAGGAGGGGTTCTGGTACCACCATGCTGAGCCAAGCTATCTAATGCTAGTTTATTGGATTCCCCAAACAGGCTGCACAATCCCTATAAATGCTTCCCACCGTGTTGCCGTTGCTGCTATAGTCTTAAATCAAAACAAAGAGGTTCTTGTAGTACAGGAAAAAAGAGGTAGATTCCATGGAATTGGCTACTGGAAGTTACCTACTGGAGTTGTCGACGCGGGTGAGGAGATTTTTGCAGCAGCTATTAGAGAAGTAAAAGAAGAGACAGGAGTTGATACCGAATTTGTAGAAATACTAGCATTCAGGGAAGTGCAGAATTCATTCTTTGGGAAATCAGATTTGTCATTTCTTTGCATGTTGCGCCCTCTTTCTGTTGAGATCAAAAAGCAAGAATTGGAAATTGAAGCAGCTCAGTGGATGCCGTTCGAGGAATTCGCAGTTCAACCACTTACTCAGAAACATGAACCCTTCAAGTACGTAGTTGAATTATGTTTGGCAAATGTGGAAGAAAAGTTCTATACTGGATTCTCCCCAAGGCGAGTCTCATCATATTTTGAGGATCAATTGAACTATTTATATATGAATATCAATGAATTGGACAAGTCTTCTTAA 945 0.3979 MKKVVLISLSHPFFPSPFSLSSIVQSSMSVSTIPAPKLGERLCENGFEHPKILPAIDDAHGGVIVDLNEPMDPEHFATLLRSSLLHWNLKGKHGVWIKLPISLVNLVETAVKEGFWYHHAEPSYLMLVYWIPQTGCTIPINASHRVAVAAIVLNQNKEVLVVQEKRGRFHGIGYWKLPTGVVDAGEEIFAAAIREVKEETGVDTEFVEILAFREVQNSFFGKSDLSFLCMLRPLSVEIKKQELEIEAAQWMPFEEFAVQPLTQKHEPFKYVVELCLANVEEKFYTGFSPRRVSSYFEDQLNYLYMNINELDKSS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00531 314 ProSiteProfiles Nudix hydrolase domain profile. 143 275 IPR000086 -
Aip01g00531 314 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 229 253 IPR003293 -
Aip01g00531 314 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 141 159 IPR003293 -
Aip01g00531 314 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 103 121 IPR003293 -
Aip01g00531 314 PANTHER NUDIX HYDROLASE RELATED 24 313 IPR003293 -
Aip01g00531 314 PANTHER NUDIX HYDROLASE 2 24 313 - -
Aip01g00531 314 SUPERFAMILY Nudix 111 272 IPR015797 -
Aip01g00531 314 ProSitePatterns Nudix box signature. 180 201 IPR020084 GO:0016787
Aip01g00531 314 Gene3D - 51 135 - -
Aip01g00531 314 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 145 285 - -
Aip01g00531 314 Pfam NUDIX domain 144 268 IPR000086 -
Aip01g00531 314 Pfam Nudix hydrolase domain 54 131 IPR040618 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00531 Aip-Chr1 7805586 7811243 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00531 - - gmx:100783941 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00531 01 7805586 7811243 Aip01g00531 01 7805586 7811243 ECH