Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00528 ATGTCTCTTGGGTACGCAGAGAAGCTTTCCTACATAGAAGATGTCGGCAACGTTGGAATGGTTGAGCATTTCGATGCTTCTCACCTTTTGAGAGAAAAAGTGCGTCTCCTTTCTCTCTCCATTCACCTTCTTCTTAGTAAGCACTTGGTGGTCTTTACAGGTGCAGGAATATCAACTTCTTGTGGTATACCCGATTTTAGAGGTCCTAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCCTTGCCTGAAGCATCACTGCCATTTCATCGAGCGATGCCAAGTTTGACTCATATGGCTCTAGTTGAACTAGAAAAGGCTGGTATTTTAAAGTTTGTTATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTAGCTGAGTTGCATGGGAATTCTTTCATGGAAACATGTCCTTCTTGCGGGGTTGAGTACTTTCGTGACTTTGAGGTAGAAACTATTGGTTTAAAGGAGACATCACGACGCTGTTCAGATGAAAAATGTGGAGCAAGACTCAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTCCAAAGGAAATGGATCCTGCAGAGAAGCACTGCAAACAGGCAGATATAGTGTTGTGCTTGGGGACAAGTCTGCAAATAACTCCTGCGTGCAACTTGCCTTTGAAAGCAATACGTGGTGGGGGTAAAGTTGTTATTGTAAATCTTCAGAAAACTCCGAAGGACAAAAAAGCTGCTTTAGTCATTCATGGTTTTGTAGATAAGGTAATTGCAGGTGTCATGGACCAACTTAACCTGCAGATTCCTCCTTTTATAAGGATTGATCTTTTCCAGATTATCATAATGCAGGGTTTGAGCCTTGATAAAAGATATGTGAACTGGACTCTCCAAGTTGCAAGTGCTCATGGACAGAAAGCAACATTGCCTTTCATCAAATCTGTTGAGGCAATAAAATGCTATGAGAATAAGTTGAATGTTGTATACATGAGAATATTGCACCAGATGACTGGAGTCGGGCAAGAGCAGCTCTTTCTTGTTGCCTATCCTACTGGCTGCTGGTGTAATGCATTCATTAACCATTCTAATCTTATCATGAATGTAAGTTTAAAAAAATCATCACTAGGCCAGAAATTGACCAGCATACCTATCTTGTTCTGCAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAATTTCGGTGATGGCTGTGGCTGCTCGTCCCTTGAAATTGATGTTCCAGTTGATTTCAAGGGTTCAACCGACTGCTTCAACTTCGATAAGGATTTCATATTCCAAAAGCTAAGAGAGAAGGCAGTTATTGAATCAAAATGTGGTCAGAATGATGTTATTGAGAGAAAGACCATCTTGACACCAAGGGGTGATGTCACCACATATGCCATTGTAACCAATCTTGTTCACCACAGCAAAACAAGTAAATCATCCCCTGATTCTCGAAGTAACGGTGATCTTAAAAGAAGAAAACCAAGCTTCAATGGTACAGGATCATCTGGGAAGCGTTCAAAAGTGTCCAAATGTAAATCAAGATCATAG 1569 0.413 MSLGYAEKLSYIEDVGNVGMVEHFDASHLLREKVRLLSLSIHLLLSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAMPSLTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGVEYFRDFEVETIGLKETSRRCSDEKCGARLKDTVLDWEDALPPKEMDPAEKHCKQADIVLCLGTSLQITPACNLPLKAIRGGGKVVIVNLQKTPKDKKAALVIHGFVDKVIAGVMDQLNLQIPPFIRIDLFQIIIMQGLSLDKRYVNWTLQVASAHGQKATLPFIKSVEAIKCYENKLNVVYMRILHQMTGVGQEQLFLVAYPTGCWCNAFINHSNLIMNVSLKKSSLGQKLTSIPILFCRRTAYNKAFEMVLKLNFGDGCGCSSLEIDVPVDFKGSTDCFNFDKDFIFQKLREKAVIESKCGQNDVIERKTILTPRGDVTTYAIVTNLVHHSKTSKSSPDSRSNGDLKRRKPSFNGTGSSGKRSKVSKCKSRS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00528 522 Gene3D - 46 264 - -
Aip01g00528 522 ProSiteProfiles Sirtuin catalytic domain profile. 31 271 IPR026590 -
Aip01g00528 522 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 1 319 - -
Aip01g00528 522 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 1 319 - -
Aip01g00528 522 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SRT1 379 521 - -
Aip01g00528 522 CDD SIRT7 47 253 - -
Aip01g00528 522 SUPERFAMILY DHS-like NAD/FAD-binding domain 9 294 IPR029035 -
Aip01g00528 522 PANTHER NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-(6/7) FAMILY MEMBER 379 521 - -
Aip01g00528 522 Gene3D - 137 186 - -
Aip01g00528 522 Pfam Sir2 family 89 218 IPR003000 GO:0070403
Aip01g00528 522 Pfam Sir2 family 54 77 IPR003000 GO:0070403
Aip01g00528 522 MobiDBLite consensus disorder prediction 482 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00528 Aip-Chr1 7700122 7710043 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00528 K11416 - csv:101212255 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00528 01 7700122 7710043 Aip01g00528 01 7700122 7710043 ECH