Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00520 ATGTTGTTAGGTAGAACAAGCAGCAGCATTGGCATCAACAGCAGCGACCGAAAGGACACAGAATATAACGCCTTTCTCGCACCCTTCACATACCCAGCATCTAACGATACCTACCTAACCGACTCTTCTTCTAGAACCTTCCAGAACAACAGCAACCACGACGACGATCTTCTTGAGTTCGGGTTTACCAGGCCCGATTTCCCGCCGGGTCAACTCGCTGGCACCGTCGAGTTCTACCGTCGCCACGTGTTCCTCTGCTACAAGAGTCCCGCTGCGTGGCCGCCGCGGATTGAGGCCTGGGAATTTGACCGATTGCCGCGGTTGCTCCACGCCGCCGTCGTCTCCGGTAAAGGTCGCATGAAGAAGGAGACCCTCTTAACAATTTGCGAGGGACATGATGGGACCGAAACATCCAATGGTGATATGCTAATTTTTCCAGACATGGTCAGATACAGGCGATTAACACATTTTGATGTGGAAACATTCGTCGAAGAAGTTCTTGTCAACGATGGAGAATGGCGTCCTGGCAACCCCGAAGCCTTGTTGGCTTCATATGTGTTCGTGTGTTCACATGGATCCCGGGACCGGAGATGCGGAGCTTGTGGACCTGTCTTAGTTAGTAGGTTCAGGGAAGAGATAGAGTTACTTGGTCTTCAAGGTAAAGTGTTTGTTAGCCCATGCTCTCACATTGGGAGGCACAAGTGTGGAGGAAATGTCATTATATTCGGGTCAAGCATCAATGGAGAAGCCACTGGCCATTGGTATGGATATGTTACTCCGAAAGATGTACCTTTGTTGATTCAACAACATATAATTAAAGGAGAAATTTTGGACTCGTTATGGAGGGGCCAAATTGGTTTGACAGAAGAAGAACAAAAAAAGAGCCAAGAACAAAGGATTCGTCAGAACAGTGTAACAAATTTTAAAGAAAACACAGAAGAGTTCATGGATACAAACAATCATACAACAGGCACTGTTGCGTTTCAATTCCAAGAGAGCATTGCAACCTGTTGCCAAGATAATGGATATTCCTCTTGCCATCAGGACGATCATATGTCGTTAGAAAAGACGAAGATCGCTGGAGCCATTGAGACGGAGGCAAAGCTCTTAACTGATGATGATGAGTTCAGAGAGAATGTACCGTCTCGGGTAAGTAATGGCAAAGCAGCATCACGCAAATTTTGTTCCATTCCAACATGGCTTGACTACTGGGAGCAAGAAGATACTTATGCTGCTCTTTCTGTCGTATGCGCTGCCGTGTCGGTTGTTATTGCCTATCGCTGCTACAAGAACAGCTGA 1299 0.4704 MLLGRTSSSIGINSSDRKDTEYNAFLAPFTYPASNDTYLTDSSSRTFQNNSNHDDDLLEFGFTRPDFPPGQLAGTVEFYRRHVFLCYKSPAAWPPRIEAWEFDRLPRLLHAAVVSGKGRMKKETLLTICEGHDGTETSNGDMLIFPDMVRYRRLTHFDVETFVEEVLVNDGEWRPGNPEALLASYVFVCSHGSRDRRCGACGPVLVSRFREEIELLGLQGKVFVSPCSHIGRHKCGGNVIIFGSSINGEATGHWYGYVTPKDVPLLIQQHIIKGEILDSLWRGQIGLTEEEQKKSQEQRIRQNSVTNFKENTEEFMDTNNHTTGTVAFQFQESIATCCQDNGYSSCHQDDHMSLEKTKIAGAIETEAKLLTDDDEFRENVPSRVSNGKAASRKFCSIPTWLDYWEQEDTYAALSVVCAAVSVVIAYRCYKNS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00520 432 Pfam Sucrase/ferredoxin-like 72 283 IPR009737 -
Aip01g00520 432 SUPERFAMILY Thioredoxin-like 185 286 IPR036249 -
Aip01g00520 432 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 50 431 IPR009737 -
Aip01g00520 432 PANTHER SUCRASE-LIKE PROTEIN 50 431 - -
Aip01g00520 432 CDD TRX_Fd_Sucrase 184 285 IPR009737 -
Aip01g00520 432 Gene3D Glutaredoxin 183 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00520 Aip-Chr1 7406807 7410734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00520 - - gmx:100780395 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00520 01 7406807 7410734 Aip01g00520 01 7406807 7410734 ECH
Aip01g00520 01 7406807 7410734 Aip07g00153 07 1184339 1187166 PCT