Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00518 ATGGAAACTAGAAGAGAGGATGCTGAAATTGAAGACATTTCAATAATGTCACCTCCCTTAGTGGGTTCTATGAGAATTGAAGGGTGCAACAATAATGACTATTCTCACAACAATAATGAGTTTTTGTCTCATTCATACTTTCACAACAACTGCTCTGAGATTGATATTCAAATTGATGATTCCAGTTTCAATCAAATTGGCCCTCTCCCCATATATCTCAAGTTTGAAGATGTAGAGTTTAAAGTGAGAAACAATACACGAGCAGCTTCGAAAAACCCTGTGAAGAGAATAGTATCAAAGGTAACTAGAGAAAATAAGAATAATAATGGGGAAGGTGATGATAAATACAAGAAGATTTTGAAGGGTATAACAGGAAGCATTGGACCTGGTGAAATTCTAGCACTAATGGGTCCTTCTGGGAGTGGCAAAACAACCTTGTTGAGAGTCATAGGAGCAAGATTACTTGACAATGTAAAAGGAAAAATCACCTACAACGATGTTCGTTATACGCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATATTCTTTTTCCACAATTAACTGTTGAAGAAACATTAGTTTTCTCCGCATTATTAAGGCTACCAACTAATATGAGCAAGCAGCAAAAATATGCAAAAGTGGACACCACTATCAAGCAGCTAGGCCTTGAAAGATGTCGCAACACAAAAATAGGAGGGGGATATCTGAAAGGCATATCAGGAGGGGAAAGGAAGAGAACAAGCATAGGTTATGAAATTCTTGTTGATCCTTCATTGCTACTGCTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCAAACAAACTTCTTGTCACTCTTCAGGGGCTTGCCAAGGCAGGAAGGACCATAATTACAACAATACATCAGCCATCAAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCGGTTTACTATGGTAAGGCCAGAGAATCAATGGACTACTTCTCTTCCTTGAGGTTCATGCCGGAGATACCGATGAATCCGGCCGAGTTCTTGCTCGACTTGGCTACCGGACAAGTCAACGATATAAGTTTTCCAGCCGAAGTTTTGCAAGATCAACTAACTAATGACCCTTCTAGAGCGGTTATTAATTATCTAAAAATAAAGTATAAAGCTTTGTTGGAGCCAAAGGAAAAGGAAAACCATGGAGCAGCAACAACAGCAGAGCATCTTCAACAAGCAATTCAAGTTAAGAAGGAGTGGACATTGAGTTGGTTGGACCAATTTGTGATTCTTTCTAGGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAGTTAAGGCTAGTTCAAGCACTTGGCATTGCACTCTTGTTGGGATTACTTTGGTGGAAATCCTCAACCAACACTGAGGCTCAACTCAGAGATCAGGTTGGTTTAATGTTCTATATATGTATATTCTGGACATCTACATGCATTTTTGGAGCAGTGTACGTGTTTCCATTCGAAAAGATATACTTGATAAAAGAAAGGAAAGCAGACATGTATAGATTAAGCGTATACTACGCATGCAGCACGCTGTGTGACATGGTGGCGCATGTTTTCTATCCCACTTTCTTCATGATCATTGTCTATTTCATGGCCGGCTTCAAGAGGACCGTGGCCTGCTTCTTCTTGACTCTCTTCTCCGTTCTGTTAATCGCCGTCACCAGTCAGGGCGCTGGAGAATTGTTTGGAGCTGCAGTTATGAGTATTAAAAGAGCAGGCATGGCTGCTTCTTTGGTGCTTATGTTGTTCCTTCTTACTGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAGTGGTTGAAGTATTTATCCTACTTATTCTACGGATTCAGGCTTCTTCTAAAAGTGCAGTATTCCGGAGACCAATTATATGACTGTGAAAGTGAGGGAGGGTGCAGACCCTTGCAAAGTTCACCAACATTTAGCACTGTTAACTTGAAAGGTGGCTTGAAAGAAGTTTGGGTTGTGCTAGCCATGGCTATGTGCTTCAGGTTCTTGGCTTACATTTGCCTCCGCAGAAGAATTGATGCCTACAAATAA 2088 0.408 METRREDAEIEDISIMSPPLVGSMRIEGCNNNDYSHNNNEFLSHSYFHNNCSEIDIQIDDSSFNQIGPLPIYLKFEDVEFKVRNNTRAASKNPVKRIVSKVTRENKNNNGEGDDKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGARLLDNVKGKITYNDVRYTPAVKRRIGFVTQEDILFPQLTVEETLVFSALLRLPTNMSKQQKYAKVDTTIKQLGLERCRNTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLVTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARESMDYFSSLRFMPEIPMNPAEFLLDLATGQVNDISFPAEVLQDQLTNDPSRAVINYLKIKYKALLEPKEKENHGAATTAEHLQQAIQVKKEWTLSWLDQFVILSRRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSTCIFGAVYVFPFEKIYLIKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMIIVYFMAGFKRTVACFFLTLFSVLLIAVTSQGAGELFGAAVMSIKRAGMAASLVLMLFLLTGGYYVQHIPKFMQWLKYLSYLFYGFRLLLKVQYSGDQLYDCESEGGCRPLQSSPTFSTVNLKGGLKEVWVVLAMAMCFRFLAYICLRRRIDAYK 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00518 695 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 101 342 IPR003439 GO:0005524
Aip01g00518 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 7 691 - -
Aip01g00518 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 336 IPR027417 -
Aip01g00518 695 Pfam ABC-2 type transporter 426 634 IPR013525 GO:0016020|GO:0140359
Aip01g00518 695 Gene3D - 108 337 IPR027417 -
Aip01g00518 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 691 - -
Aip01g00518 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 161 IPR027417 -
Aip01g00518 695 CDD ABCG_EPDR 115 324 - -
Aip01g00518 695 Pfam ABC transporter 120 270 IPR003439 GO:0005524
Aip01g00518 695 SMART AAA_5 129 320 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00518 Aip-Chr1 7330965 7337115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00518 118 303 Calmodulin-binding Proteins AT2G36910 30.526 1.09e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00518 K05681 - gmx:100806094 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00518 01 7330965 7337115 Aip01g00518 01 7330965 7337115 ECH