Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00483 ATGGCAGATGACTGTGCATCAAACGACAGCACACCACTGCTGCAAACCCAGTATGCGGAATCGGAGCCGAAAAGAACAGGCACAGTGTGGACAGCAGTGGCGCACATAGTGACAGGTGTCATAGGCTCAGGAGTCCTCTCACTCGCATGGAGCATAGCCCAGCTTGGATGGATCGGAGGCCCTCTCGCAATGCTTCTCTTCGCTTCCATCACTCTTCTTTCCTCTTTTCTTCTCAGCAACACTTATCGCTCCCCTGACCCTGAATATGGACCCAAACGGAGTTCTTCTTATCTTGACGCCGTTAATATTCATCAGGGAGTTGGAACTGGAAGGCTCTGTGGTGTTTTCGTGAATGTGAGCTTATATGGTTTTGGAATCGCCTACATTATTACTTCAGCTATCAGCATGAGGTCAATCCAAGAATCAAACTGTCACATTAAGAACGGGAATGGTGCATGTGAGTTTGGGGATTCATACTACATGCTTATATTTGGAGTTATCCAGATTCTTCTTTCACAGATACCAAACTTCCATAACATTCAGTGGCTTTCGGTTGTCGCGGCGGTTATGTCCTTTGCTTATGCCTTCATAGGAATGGGGTTCGCCATCAAGCAAACCGTAGAAAAAGGATATGCTGAGGGTACCATTGAAGGAATTCCTACTTCTACTGATGTTCAAAAGATGTGGCTGGTTGCTCAAGCTCTTGGTGACATAGCATTCTCCTATCCATTCTCAGTAATTCTTATAGAAGTACAGGATACCTTGAAGTCACCTCCTCCTGAAAACGTAACCATGAGGAGGGCCTCGCTAATAGCAGTCATTATCACGACGTTTTTCTACCTCTGTTGCGGCTGTGCTGGATATGCAGCTTTCGGCAATGACACACCGGGAAACCTTTTAACAGGGTTTGAATTTGCAAGGCCTCACTGGCTAGTAGACTTTGCCAATGCTTGTATAGTTGTTCATCTTGTTGGTGCATATCAGGTGTATAGCCAGCCACTCTTCGCCAATGTTGAAAATTGGCTTCGGTTCAAATTCCCGGACAGCGATTTTGTGAATCAAACATATAACTTGAAACTTCCTTTTCTGCCAGCTTTTCCGTNNNNNNNNNNNNNNNNNNNTGGCATAATCTTTTGGCCATTAACGATATATTTTCCAGTGGAAATGTACTTGAGTCAGGGCAACATTCAACCATGGACAACGAAGTGGGTCTTGCTTAGAACTTTTAGCATTGTTTGTTTTGTGGTGGGAATGTTTACTCTTGTTGGATCCATTGAAGGAATAATAAGTGCAAAATTAAGCTGA 1305 0.4383 MADDCASNDSTPLLQTQYAESEPKRTGTVWTAVAHIVTGVIGSGVLSLAWSIAQLGWIGGPLAMLLFASITLLSSFLLSNTYRSPDPEYGPKRSSSYLDAVNIHQGVGTGRLCGVFVNVSLYGFGIAYIITSAISMRSIQESNCHIKNGNGACEFGDSYYMLIFGVIQILLSQIPNFHNIQWLSVVAAVMSFAYAFIGMGFAIKQTVEKGYAEGTIEGIPTSTDVQKMWLVAQALGDIAFSYPFSVILIEVQDTLKSPPPENVTMRRASLIAVIITTFFYLCCGCAGYAAFGNDTPGNLLTGFEFARPHWLVDFANACIVVHLVGAYQVYSQPLFANVENWLRFKFPDSDFVNQTYNLKLPFLPAFPXXXXXXXGIIFWPLTIYFPVEMYLSQGNIQPWTTKWVLLRTFSIVCFVVGMFTLVGSIEGIISAKLS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00483 434 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 9 363 - -
Aip01g00483 434 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 373 433 - -
Aip01g00483 434 Gene3D Amino acid/polyamine transporter I 22 333 - -
Aip01g00483 434 PANTHER OS05G0424000 PROTEIN-RELATED 373 433 - -
Aip01g00483 434 Pfam Transmembrane amino acid transporter protein 25 351 IPR013057 -
Aip01g00483 434 PANTHER OS05G0424000 PROTEIN-RELATED 9 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00483 Aip-Chr1 6430302 6434948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00483 4 429 Organic Solute Cotransporters AT5G09220 46.739 1.98e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00483 K24917 - gmx:100801302 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00483 01 6430302 6434948 Aip01g00483 01 6430302 6434948 ECH