Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00481 ATGCATCTCTACAATGCATGGCTTCCACCGCCGCTCGCCGCCCAAACCGCCGCCGAGAGGGACTCATTCCGCCGTGTCATCTCCGACGTCTCCGCCTCCTTCCGCCCTGACGATCCCGAATCCGTCTTCTCCACTCTCAAATTCATCTCTGTCCTTGACCTTTTTATAAAGGCCAAAAGTGATGTAGCTTTGGAAGATGTCGAAGCCCTTATTCAGATGGGCCTTGAACTATTTCACTTGTCCCGTAACAAGCTTTATGCACAGGTTAGATGGGGAAATTTGTTAGTCAGACTACTCAACAAATATAGGAAAAAGATTGCATTGAGTATTCAGTGGCGGCCTTTGTATGATACGTTGATCAGCACACATTTTACTAGAAGTACAGGTCCAGAAGGTTGGAGAATAAGACAACGACACTTTGAAGCTATAACTACCCTTGTTCAGTCCTGCCGGAGATTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAATCTTTATTGCAAAACCCATGGCATAATTCATCCTTTGAGGGATCTGGGTTTGCAAGACTATTCCTTCCTATGAATGTGGACAATCAGGATTTTTATTCACATGGTTGGATTGAAGAATGTATAGACTTGTGGGGATCTATACCAAATTGCCAATTCTGGAACAGTCAATGGGCAGATGTGGTAGCCCGGGTCATAAAAAATTACCACAATCTTGATTTGGAGTGCTTTCTGCCTTTGCTTTTTGCCAGATACTTGAATATGTTTGAGGTTCCTGTGGCAAATGGCAGCGGATCTTATCCCTATTCATTGGATGTCCCAAGGAACACGAGGTTCTTGTTCTCCAACAAAAGTTCCACTCCTGCAAAGGCTATAGCCAAAACAATTGTATATTTATTAAAACCTGGTAGTTCATCACAACAGCACTTTGAGAAGTTGATCAACATTTTGGAGCAATACTATCATCCCTCGAATGGTGGTCGATGGACTTACTCATTGGAGCGATTTTTGTTTCATTTGGTGCTTCAGTTTCAGAAGCGCCTGCAGAACGAACAGTTGGGCACAAAAAATAGCAAACCAATTGAACAACATCTTGGGAAATCAGAGAGGGTCTTCTTTGTTAATTCTGTGCTAAAGTTAATTGATCGGGGACAATACAGCAAGAATGAGCATCTCTCTGAGACAGTAGCTGCAGCAACTTCGATATTATCCTATGTGGAACCCTCTTTGGTTCTACCATTTGTGGCATCTCGGTTCAGAATGGCCCTTGAGACGATGACTGCCATCCACCAGTTGAAAATTGCAGTTATGTCAGTGGCATTTGTTGGGCGTTCACTATTTTTTACGTCCGTATCAGCTTCCTCAATGAAACAAGTTGATCTTGGTGGTGATGATGAAACATTAATTGATCTTATGGGGGTTTCATTATCGAATGCATTACTTGGCATGGATGCTAATGACCCTCCGAAGACCTTGGCTACCATGCAGTTAATTGGTTCCATCTTTTCAAATTTGGCTTTATTGGATGATAAGATTGATGACTTGTCATTTATGCCGATGATACGTTTCTCTGAATGGCTGGATGAGTTCTTATGCCGTCTCTTTTCCTTATTTCTACACTTGGAACCAAGCAGTGTTATAAATGAAGGTCTGCACTCTTCAGCAGCATCAGCGACTTTTCTGGTTGATGATGGTCCATACTACTTCTGTCTGCTTGAAATTCTGCTTGGGAGGCTTTCAGAATCACTTTATAATCAGGCTTTGAAGAAAATTTCCAAGTTTGTGAGGACAAATATTCTTCCTGGTGCTATTACTGAGGTTGCACTGCTCTGTTGTGCATGCGTACACTCAAACCCAGAAGAAGCAGTTAGTCAACTCGTTGAGCCAATATTAGCATCTGTGATATCCTCCTTGAAAGGAACACCACACACTGGATTTGCAGGAGGAACCTTTTATGCTTCTTCAACCAAGAATAGATCCACAATTTCACCAGCTCTTGAGGCTGCAATCGACTATCAATTAAGAATAATATCAGTTGGCATCATTTTTGGCGGTCCGGCAATACTCCGCTATAAGGATCAATTTAAAGAAGCTGTCTTCTTGGCTTTTGACTCACCATCCTGGAAGGTTAATGGGGCTGCTGATCATCTTCTCCGATGCCTTCTTGGAAGTCAGGTTTATTATTATCCAATAGATCAGTACAGATGTGTTCTCAGTCATCCTGATGCTGCTGCTCTAGAAGAATGGATTAGTACAAAAGATTTTACTGCAGATGAAAGATTGACCCCGAAGTGGCATATTCCTTGTGATGAAGAAGTTCAGTTTGCAAATGAGCTTTTAGACATTCACTTTAAGTTAGCTTTGGATGATCTGTTAAGAATATGTGAAACTAAAATGCATGTGGATCAAGGGGATGAGAAAGAGCACTTGAAAGTGACTCTCTTACGAATTGAGTCATCATTGCAAGGACTTTTTTCTTGCTTGCCTGATTTTGTCCCAAATTCAAGGAATGGGATGGCTGATGATTCAGATCATAAGTTTCTAATTGCTGGAGCAACAGGTTGTACTGTTGGCAGTACCGCTTTGCGAGAAAAAGCTGCCGAGATTGTACATACAGCCTGCAAGTATATTCTGGAGAAAAAATCAGATGACAGCATCCTTTTGATACTCATTATACGCATTATGGATTCTTTAGGAAATTATGGTAGTTTGGAATATGATGAGTGGTTGAGTCACAGGCAGGCTTGGAAGTTGGAATCTGCTGCCATAGTAGAACCTCCGGTTAATTTCATTGTGTCAAGTCGTTCTAAAGGAAAGAAAAGACCTAGGTGGGCTCTTATTGACAAGGCATTCATGCACAATACGTGGAGATCTTCACAAGCATCCTATCATCTTTATAGAACAAGTGGGAATTTCAGCCCATCAGATCATGTGACCCTTTTGGTGGATGATTTGTTGAGTCTCTCTTTGCATAGCTATGAAACAGTGCGCCTGCTTGCAGGAAAAGCTCTAGTGAAGCTAATCAAGAGATGGCCGTCTATGATCTCTAAGTGTGTTATCACCCTTACCAACAAGTTGCAGGATTCCAATGCCGAGGAATATGCAGTGCTGGGTTCTTGTTCGGTCCTTGCCTCACAAACGGTTCTTAAACATTTGACTACGGATCTGAAGTCATTCTCTTCATTTAACATGGCTATTCTCTCAAGTTCTCATCATGAATCCTTGAAAGCTCAGAAAGCAATTAATGAGCTTTTTGTAAAGTACAACATCCAATTTTCTGGAGTATCTAAAAGCTTTTTTAGGATATCAGACAAAGACAACCATACTTGTGGGCTGGGATTTTCAGATTTGGTTTCTCAGATTGGCTCTATGAGTTTTGATTCCACTGGCTTGCATTGGCGGTATAATTTAATGGCTAACAGAGTTTTGCTCTTGCTAGCTTTGGCTTCTCGGAACCACCCAAATTCATCAACTAGAATCCTGAGTGAAACAGCTGGCCACTTTTTGAAGAATTTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCAATTTCGGCTTTGAATACACTCTTAAAGGAATCACCGTACAAGCTGTCACCTGGTGAGAAATCTGCTGTACTCGAGGATTTGCAAGGCAATGCCAAGTCATCCCTTGAAGAAGCTTTAACTCACACCTTTCAGGAAGAGGGTTTCTTCAACGAGACACTCAATAGTCTTTCTCATGTTCATATCATAAGTGATTCTGAAAGTGCTTCTAGAGGAGGTCATGGAGATTCCAGTTTCCAAAGCTTGGCTGACAAATCTATAACCCGCTTCTACTTTGAATTCTCGGCTTCATGGCCACGCACTCCAAGTTGGATCTCATTTTTTGGGAGTGATACATTCTACTCAAGTTTTGCACGTATTTTCAAGCGGCTTGTACAAGAATGCGGCATGCCAGTTGTAGTGGCGCTAAAAGGCGCTGTAGATGAGTTTACAACTGCCAAGGAGAGGTCTAAACAATGTGTAGCTGCTGAAGTATTGGCGGGTGTGTTACACTCTGATGTTGATGGTCTATTGGGAGAGTGGGAAAGCTGGCTCATGCCTCAGTTGAAGAATATCATTCTAGCACAATCTGTTGAATCAGTTCCTGAATGGGCCACTTGCATACGGTATGCAGTTACTGGCAAAGGGAAATATGGAACAAGAGTTCCTCTGCTGAGGCAGAAAATTCTTGATGCTTTGATGACACCTTTACCTCCAACAGTAGCTACCACTGTAACAGCCAAGCGATATGCTTTTCTGGCAGCTGCGCTGATAGAAATATCCCCACAGAAAATGCCAGCTGCTGAAATCCAGCTCCACAATATACTCTTGAATGAAGTTCTTGGTAATATGTGCCACTCATCAGCCCAAGTGAGGGAAGCTCTAGGTGTTACCCTATCTGTTTTGTGCTCAAACATTCGACTATATCATTCAAGTCATCATGATGATACAAGCAGCAATGTTGATACTCCGATGAAAGATGAAAGCTGGGTTCAGCTTCTTACTGAACGAGCTGCTGAAGCAGTTGTTAACATTCAGAATGTTAGCCAATCAGACAAAGTAACCAATCCCATAGATACGAGATCTCAAAATGGGCATGCAGACAATGATTCTCAAGATGATACGAAGTGGATGGAGACGCTACTATGCTTCATCATCTCATCATTGAAGTCTGGGAGATCCTCTTATCTACTTGATGTTATTGTGGGGCTTCTTCATCCTGTTATTTCTTTGCAGGAAACCTCAAATAAAGATTTAGCAACAGTAGCAAAGGCAGCTTTTGAATTGCTAAAATGGATGATTGTCTGGGAACCTCACCTCCAGAAGGCTATCTCTGTGATTCTTTCTGCTGCCAGTGATCCTAATTGGCGAACTAGATCTGCTACTTTGACATATCTGCGCACTTTCATGTACAGGCACACTTTCATTCTCTCAAGTCCGAAGAAACATGAAATTTGGGGTACTGTTGAGAAGTTACTAGTAGACAACCAAGTTGAGGTAAGAGAACATGCGGCAGCAGTCTTAGCAGGATTAATGAAGAGTGGAGATGAAGATATAGCTAAGGATTTCCGCAATAGAGCTTATGTAGAGGCAAATAATGTATATAAGAGAAGGAAGTCAAGAAAATCAAGTTCTGGTTCATCCATGGCCTCTGTTCATGGTGCTGTACTAGCTTTGGCAGCTTCTGTATTATCAGCTCCATATGATATGCCCAGTTGGTTGCCTGAGCATGTTACATTGCTGGCTCGTTTCAGTGGGGAGCCCTCCCCTGTGAAATCTACTGTTACAAAAGCTATAGCAGAGTTCCGGCGCACTCACGCTGATACATGGAATGTTCAGAAAGAGTTATTTACAGAAGAGCAACTCGAGATCTTGGCAGATACATCATCTTCATCATCGTATTTTGCTTGA 5433 0.4209 MHLYNAWLPPPLAAQTAAERDSFRRVISDVSASFRPDDPESVFSTLKFISVLDLFIKAKSDVALEDVEALIQMGLELFHLSRNKLYAQVRWGNLLVRLLNKYRKKIALSIQWRPLYDTLISTHFTRSTGPEGWRIRQRHFEAITTLVQSCRRFFPSGSAFEIWSEFKSLLQNPWHNSSFEGSGFARLFLPMNVDNQDFYSHGWIEECIDLWGSIPNCQFWNSQWADVVARVIKNYHNLDLECFLPLLFARYLNMFEVPVANGSGSYPYSLDVPRNTRFLFSNKSSTPAKAIAKTIVYLLKPGSSSQQHFEKLINILEQYYHPSNGGRWTYSLERFLFHLVLQFQKRLQNEQLGTKNSKPIEQHLGKSERVFFVNSVLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFVASRFRMALETMTAIHQLKIAVMSVAFVGRSLFFTSVSASSMKQVDLGGDDETLIDLMGVSLSNALLGMDANDPPKTLATMQLIGSIFSNLALLDDKIDDLSFMPMIRFSEWLDEFLCRLFSLFLHLEPSSVINEGLHSSAASATFLVDDGPYYFCLLEILLGRLSESLYNQALKKISKFVRTNILPGAITEVALLCCACVHSNPEEAVSQLVEPILASVISSLKGTPHTGFAGGTFYASSTKNRSTISPALEAAIDYQLRIISVGIIFGGPAILRYKDQFKEAVFLAFDSPSWKVNGAADHLLRCLLGSQVYYYPIDQYRCVLSHPDAAALEEWISTKDFTADERLTPKWHIPCDEEVQFANELLDIHFKLALDDLLRICETKMHVDQGDEKEHLKVTLLRIESSLQGLFSCLPDFVPNSRNGMADDSDHKFLIAGATGCTVGSTALREKAAEIVHTACKYILEKKSDDSILLILIIRIMDSLGNYGSLEYDEWLSHRQAWKLESAAIVEPPVNFIVSSRSKGKKRPRWALIDKAFMHNTWRSSQASYHLYRTSGNFSPSDHVTLLVDDLLSLSLHSYETVRLLAGKALVKLIKRWPSMISKCVITLTNKLQDSNAEEYAVLGSCSVLASQTVLKHLTTDLKSFSSFNMAILSSSHHESLKAQKAINELFVKYNIQFSGVSKSFFRISDKDNHTCGLGFSDLVSQIGSMSFDSTGLHWRYNLMANRVLLLLALASRNHPNSSTRILSETAGHFLKNLKSQLPQTRILAISALNTLLKESPYKLSPGEKSAVLEDLQGNAKSSLEEALTHTFQEEGFFNETLNSLSHVHIISDSESASRGGHGDSSFQSLADKSITRFYFEFSASWPRTPSWISFFGSDTFYSSFARIFKRLVQECGMPVVVALKGAVDEFTTAKERSKQCVAAEVLAGVLHSDVDGLLGEWESWLMPQLKNIILAQSVESVPEWATCIRYAVTGKGKYGTRVPLLRQKILDALMTPLPPTVATTVTAKRYAFLAAALIEISPQKMPAAEIQLHNILLNEVLGNMCHSSAQVREALGVTLSVLCSNIRLYHSSHHDDTSSNVDTPMKDESWVQLLTERAAEAVVNIQNVSQSDKVTNPIDTRSQNGHADNDSQDDTKWMETLLCFIISSLKSGRSSYLLDVIVGLLHPVISLQETSNKDLATVAKAAFELLKWMIVWEPHLQKAISVILSAASDPNWRTRSATLTYLRTFMYRHTFILSSPKKHEIWGTVEKLLVDNQVEVREHAAAVLAGLMKSGDEDIAKDFRNRAYVEANNVYKRRKSRKSSSGSSMASVHGAVLALAASVLSAPYDMPSWLPEHVTLLARFSGEPSPVKSTVTKAIAEFRRTHADTWNVQKELFTEEQLEILADTSSSSSYFA 1810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00481 1810 Pfam Proteasome-substrate-size regulator, mid region 520 823 IPR032430 -
Aip01g00481 1810 Pfam Proteasome-substrate-size regulator, mid region 310 506 IPR032430 -
Aip01g00481 1810 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1810 - -
Aip01g00481 1810 Gene3D - 1553 1699 IPR011989 -
Aip01g00481 1810 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 1 1810 IPR035309 GO:0016504|GO:0070577|GO:0070628
Aip01g00481 1810 MobiDBLite consensus disorder prediction 1527 1546 - -
Aip01g00481 1810 Pfam Domain of unknown function (DUF3437) 1725 1810 IPR021843 -
Aip01g00481 1810 SUPERFAMILY ARM repeat 825 1779 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00481 Aip-Chr1 6406890 6424596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00481 K06699 - gmx:100814812 3128.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00481 01 6406890 6424596 Aip01g00481 01 6406890 6424596 ECH