Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00318 ATGAAGACTTTCCACTTCCCTAGTAAGATATGTTGCTCCTTGTTCTTACTTGTCCTTTTTGCTCTAATCGCCTCACTAGCTTCGGCAGCACAAACTCATTACCATAATTTTGTTATTCAACCTAAGCCAGTGAAGAGGCTGTGCAAAGTTCAAAACATACTCACTGTCAATGGTCAGTTTCCAGGGCCAACCGTGGAGGCCAGAAACGGAGATTCTCTTGTCATCAAAGTAGTAAATGCAGCAAAGTACAACATCTCTATCCACTGGCATGGATTAAGGATGGTGCGAAATCCATGGGCAGATGGACCTAGCTATGTGACTCAGTGTCCCATAAAGCCAGGGGGAAGTTACACATACCGGTTTACGATCGTAAACCAAGAAGGGACACTATGGTGGCATGCACACACTGGCTTCCTAAGAGCCACTGTCTATGGAGCTCTGATCATCCATCCCAAAATGGGCTCGCCTTATCCCTTCCCTACGCCTCGGCGAGAATTTCCCATCCTTCTTGGGGAATGGTTTGACAGGGATCCGATGCTTCTCTTAAGGCAGGCACAATTTACAGGAGCAGCACCAAATGTATCAGTAGCATATACCATTAACGGGCAACCTGGTGACCTCTACAGATGCTCGAGTCAAGAAACTGCACGCATTCTGGTAGATGCCGGGGAGACAATTCTCTTGAGGATCATCAACAGTGCACTCAATCAAGAACTCTTCTTTGGGATTGCCAACCACATGATGACAGTTGTTGGTACAGATGCTGCTTACACCAAGCCTTTCCCCACAAGAGTCCTAACAATAGGACCTGGTCAGACGATCAATGTCCTAGTCACTACCAACCAACCACCAGGTCGATATTACATGGCAGCACGTGCCTATCAAACAGCCCAAAATGCTGCCTTTGACAACACCACTACCACAGCAATACTTGAATACAGATCTGCTAGCCGCAGTAACAAGAACAGACCAATATTGCCGGTTCTTCCAGCCTTCAATGATACAGCCACTGCCACCGCATTCACTACTGGGCTCAGGGGTCTTTCTAGGATTCAAGTCTTTACAAAGGTTGATGTGAGTCTATACTTCATAGTGGGTTTGGGGTTGATCAACTGCACAAACCCTAATAGTCCTAGGTGTCAAGGACCTAATGGCACTCGCTTCACAGCAAGCATGAACAATGTTTCTTTTATACTCCCAAGGACCACCTCCCTAATGCAAGCTTACTATCAAAGAATACCTGGTGTCTTCACCACTGATTTCCCTCCGGTTCCACCTGTACAATTTAATTATACTGGCAGTGTGCCGCGGGGACTATGGACACCTTCCCAAGGAACAAAGCTCTACAAGTTGAAGTATGGTTCTAGGGTGCAAATTGTTTTGCAGGACACAAGTATAGTAACTACCGAAGAACACCCCATGCACATTCATGGATTCCACTTCTTTGTAGTTGGTTCAGGTTTTGGCAACTTCAATCCAGCAACGGATCCAGCCAATTTTAACCTTGTTGATCCACCAGTGAGAAACACCATTGGAACACCTCCTGGAGGATGGGTAGCCATTCGATTTCTGGCTGATAATCCAGGAATTTGGTTTGTCCACTGTCACATAGATTCACATCTAAATTGGGGTTTGGCAACAGCATTTCTAGTGGAGAATGGAGTTGGACCATCACAGTCAGTAATACCTCCACCGACAGATCTGCCCCCATGTTAA 1716 0.4621 MKTFHFPSKICCSLFLLVLFALIASLASAAQTHYHNFVIQPKPVKRLCKVQNILTVNGQFPGPTVEARNGDSLVIKVVNAAKYNISIHWHGLRMVRNPWADGPSYVTQCPIKPGGSYTYRFTIVNQEGTLWWHAHTGFLRATVYGALIIHPKMGSPYPFPTPRREFPILLGEWFDRDPMLLLRQAQFTGAAPNVSVAYTINGQPGDLYRCSSQETARILVDAGETILLRIINSALNQELFFGIANHMMTVVGTDAAYTKPFPTRVLTIGPGQTINVLVTTNQPPGRYYMAARAYQTAQNAAFDNTTTTAILEYRSASRSNKNRPILPVLPAFNDTATATAFTTGLRGLSRIQVFTKVDVSLYFIVGLGLINCTNPNSPRCQGPNGTRFTASMNNVSFILPRTTSLMQAYYQRIPGVFTTDFPPVPPVQFNYTGSVPRGLWTPSQGTKLYKLKYGSRVQIVLQDTSIVTTEEHPMHIHGFHFFVVGSGFGNFNPATDPANFNLVDPPVRNTIGTPPGGWVAIRFLADNPGIWFVHCHIDSHLNWGLATAFLVENGVGPSQSVIPPPTDLPPC 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00318 571 Pfam Multicopper oxidase 165 315 IPR001117 -
Aip01g00318 571 ProSitePatterns Multicopper oxidases signature 2. 534 545 IPR002355 GO:0005507
Aip01g00318 571 CDD CuRO_2_LCC_plant 166 313 IPR034285 -
Aip01g00318 571 SUPERFAMILY Cupredoxins 29 178 IPR008972 -
Aip01g00318 571 CDD CuRO_3_LCC_plant 416 554 IPR034289 GO:0005507
Aip01g00318 571 CDD CuRO_1_LCC_plant 35 151 IPR034288 GO:0005507
Aip01g00318 571 Pfam Multicopper oxidase 40 152 IPR011707 GO:0005507
Aip01g00318 571 Gene3D - 163 350 IPR008972 -
Aip01g00318 571 SUPERFAMILY Cupredoxins 159 349 IPR008972 -
Aip01g00318 571 PANTHER LACCASE-13 8 571 - -
Aip01g00318 571 Gene3D - 21 151 IPR008972 -
Aip01g00318 571 ProSitePatterns Multicopper oxidases signature 1. 529 549 IPR033138 -
Aip01g00318 571 TIGRFAM laccase: laccase 30 571 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aip01g00318 571 Gene3D - 378 571 IPR008972 -
Aip01g00318 571 SUPERFAMILY Cupredoxins 354 571 IPR008972 -
Aip01g00318 571 Pfam Multicopper oxidase 421 553 IPR011706 GO:0005507|GO:0016491
Aip01g00318 571 PANTHER MULTI-COPPER OXIDASE 8 571 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00318 Aip-Chr1 3445157 3447552 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00318 K05909 - gmx:100786719 984.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00318 01 3445157 3447552 Aip01g00318 01 3445157 3447552 ECH
Aip07g01382 07 23232370 23244345 Aip01g00318 01 3445157 3447552 ECH
Aip01g00318 01 3445157 3447552 Aip07g01383 07 23256869 23261160 PCT