Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00200 ATGGCGGATAATCAAAGAATTCACCCGGATATTGAGGCTTCACCTAGACCGTCGGCGCCGTTAGTCCCCGGAAACATTGCGAAATCCGAGAACGGCGATCCGAATAATAGCCCTCTACCACCACCACTTCCTCAAAGAACCTTGCCAGTGATGCATTCAAAGCCACCAAGGAGAAGAAGAAGCTGTTGCTGTAGATTCTTATGTTGCACATTCACAACACTCCTGATTCTCATCATTGCCATAGCAATCACTGCTGGAATCTTGTTCCTAGCATTCAGGCCAAAGATTCCAAAGTACTCAGTTGACAAACTCAGAATCACAGAGTTCAATTTCTCTAGTGGCACTAACATTCTCTCTGTCACTTCCAATGTTAGAATCACTGCTAGAAATCCAAACAAGAAAATTGGGATCTATTATGAAGGTGGGAGCCACATAAGTGCATGGTATAGTGGTTCTCAACTTTGTGAAGGGTCTATGATAAAATTCTATCAAGGTCATAAGAATACTACTGTTCTTGATTTGCCACTCAGAGGCCAAATTCAAGATGCAAGTGGATTAGTTAGCAAGATTCAGCAGCAGATTCAAGATACCAATAATATCCCTCTAGATATTAAGGTCAAACAGCCAGTTAGGGTTAAATTTGGAAAATTGAAGCTTTTTAAGGTCAATTTCAGGGTTAGGTGCAAGCTTGTGGTGGATAGCCTTAGTGCTAACAATGATATTAAGATTTCAAGCAGCAGCTGTAAGTTCAGGTTTAGACTATGA 765 0.4131 MADNQRIHPDIEASPRPSAPLVPGNIAKSENGDPNNSPLPPPLPQRTLPVMHSKPPRRRRSCCCRFLCCTFTTLLILIIAIAITAGILFLAFRPKIPKYSVDKLRITEFNFSSGTNILSVTSNVRITARNPNKKIGIYYEGGSHISAWYSGSQLCEGSMIKFYQGHKNTTVLDLPLRGQIQDASGLVSKIQQQIQDTNNIPLDIKVKQPVRVKFGKLKLFKVNFRVRCKLVVDSLSANNDIKISSSSCKFRFRL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00200 254 MobiDBLite consensus disorder prediction 1 57 - -
Aip01g00200 254 PANTHER EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN, PUTATIVE-RELATED 18 252 - -
Aip01g00200 254 MobiDBLite consensus disorder prediction 35 49 - -
Aip01g00200 254 Pfam Late embryogenesis abundant protein 125 228 IPR004864 -
Aip01g00200 254 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00200 Aip-Chr1 1987339 1988523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00200 39 242 EF-hand Containing Proteins AT5G21130 27.941 1.64e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00200 - - gmx:100789322 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00200 01 1987339 1988523 Aip07g01207 07 18029871 18030932 PCT