Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00143 ATGAGTTCCCAGACTCATACTCGAACCTCTAAACCCACAACAAAACCCTCTCAACAACAACACTCTTCATCAAAAACACCACAATCACACTCACACTCTTCTTCAACGCCTTCAACAACAACAACAAATGCTTCGTCTCTATCTACCCACCTTGCTATGGTGGAACTCAAGCAGAGGATCCTAACTTCCATTTCCAAGCTCTCGGACCGAGACACACACCAGATCGCAATCGAAGACCTCGAAAAGACCATTTTGACCCTCTCCCCTGAATCAATTCCAATGATACTCAACTCCCTATACGACGCCGCATCAGCTGACCCTAAACCCGCCGTCAAGAAAGACTCTCTCCGCCTCCTCACCTTTGTTTGCGCTTCCCATCCCGACGCCGCCGTCCCTCACCTTACGAAGATCCTCGCTGCCGTCGTTCGCCGCCTCAAGGACGCTGATTCCGGCATCCGTGAGGCGTGCCGTGAGGCAGTTGGAGCACTTGCCGCTCAGTATTTGAGAGGAGGAAGCAATGGCAATGGTAATGGTGGTGGTGATAATGGTGCTGGAGCTGGTTCGGTTGTGGCGTTGTTTGTGAGGCCGTTGTTTGAGGCGATGGGAGAGCAGAACAAGGGAGTTCAGGCTGGTGCCGCGGCTTGTTTGGCGAAGATGGTGGAATCCGCCGGCGGCGATGGTGGTGGTGGTGGGGCGCTGGTGCCGGCGTTCCAGAAGATTTGTCCAAGGATCTGTAAGCTGCTTGGAAGCCCTAATTTCTTGGCGAAGGCTGCAATCTTGCCTGTTGTTTCCAGCTTGTCACAGGTTGGAGCAATTACACCACAAAGCTTGGAACACTTGCTTCCTAGCATTCATGACTGCCTTACCAGTACTGATTGGGCAACACGTAAAGCAGCGGCTGACGCATTAAGTTCCTTGGCTCTGCACTCTAGGGGTTTGGTTGCCGATGGAGCAGCATCTACGGTAGCAGTACTGGAGGATTGCCGGTTTGACAAGATAAAACCTGTGAGAGACAGCATGACGGAGGCATTGCAATTGTGGAAAAATATTGCAGGGAAAGGAGATGGATCCCCTGATGATTCAAAGCCTGTATCTGGTGATGGTGACAAATCTAGTGCATCTCCTTTACCAGAAACAAGTGCAAAATTAAATCTTGGGGACAGGAAGATTGATCCTTCAGCAAAGGAGTCGCCCGCAGGTACTTCAGATGTGGATTCCACTGGCAAAGCAAAAGCAGCTGGCATCTCAGAGAAAGCGGTTGTAATATTAAAAAAGAAAGCACCTGCCTTAAGTGATAAAGAATTAAACCCAGAATTTTTCCAGAAACTTGAAAGAAGGGGTTCGGATGATTTGCCAGTGGAAGTAGTTCTTCCTCGGAGAGGTCTCAATTCTTCAAGCTCAAACAATGAGGAGGAATCTGGGGCTAATGCTAAAGATTCAAAAGAGAGAAACATCCCCAATCACATGTTAGACAGAGGCAATGATAGAAATTCCAAACAACATAGTTTTGATGATTTTGCACCTGATAAGAGGATGAATGCAAAAGAACTGAGGGCAAAAGCATTTGATACTGATGATAGAACTGAAATTGATCAAAGGGAGGGTTCTTCAAATCTTGCCGGTCAATCAGAAGTATCCTTCTCCAATAACAGGGGAAACTGGTTGGCCATCCAGAGGCAGCTACTGCAGCTAGAAAGGCAACAGGTTCATTTGATGAACATGCTGCAGGATTTCATGGGTGGATCTCATGATGGCATGGTGACACTAGAGAACAGAGTTCGAGGTCTAGAAAGAATTGTTGAAGACATGTCACGTGATTTATCGATATCATCTGGTCGTAGAGGTAGTAACTTCACAGGGTTTGAGGGGTCCAGTAGGCCTTCTAGCAAGTATAATGGTTTTAATGACTATTCCACTGCTAAATATGGAAGAGGTGGTGATGGACGTACTCCATTTAGCGAAAGATTTTCTCAAGCAGATGGAAATGCATTAGGTATGAGGGGAAGAGGGCCATCTTGGAGATCTGACACGTCTGAGGGATGGGATTTTCCTGGGTATGGTGCTTCCAGAAATGGGCAGATTTCCACACGGAGGGCTTTTGGTGGTAGTTCTGTTGATGCGAGATCACCAAAATCAGTTCCTGAAGGTGATCAAGGGGGCAGCAGGAGAGCTTGGGATAAAGCAGCACTGCCCATTCGGCTTGGAGAGGGGCCTTCTGCAAGAAGTGTCTGGCAAGCTTCCAAGGATGAAGCTACCTTGGAAGCGATTCGAGTTGCTGGGGAGGACAATGGAACAGCTCGAGCAACAAGAGTTGCAATCCCCGAAATGACTGCAGAAGCTATGGCTGATGACAATGTTGGACAAGATAGGGATGCCATCTGGACTTCTTGGAGCAATGCAATGCATGCCCTTCAAGTGGGTGATATTGATTCGGCCTTCGCAGAAGTGTTATCCACTGCAGATGATCTTTTGCTTGTAAAACTTATGGATAGAACGGGTCCTGTAATTGACCAACTTTCAAATGAGATTGCATGTGAGATTATGCCTGCCATCGGACAATTCTTGCTGGACCAGAACCTGCATGATATCTGTTTCTCTTGGATTCAACAGTTGTTGGAGATAGTGTTCGATAATGGTCCCGAAACCTTTGGGATTCCAATGGAAGTTAAGAAAGAGCTCTTACTGAATTTGCATGAAGCTTCCTCAGCTGACACAGCTGAGGAATGGGAAGGTATGCCACCAGATCAACTTCTATTGCAGTTGGCCTCGGCCTGGGAAATCGATCTGCAGCAGCATGACAAATAG 2805 0.4763 MSSQTHTRTSKPTTKPSQQQHSSSKTPQSHSHSSSTPSTTTTNASSLSTHLAMVELKQRILTSISKLSDRDTHQIAIEDLEKTILTLSPESIPMILNSLYDAASADPKPAVKKDSLRLLTFVCASHPDAAVPHLTKILAAVVRRLKDADSGIREACREAVGALAAQYLRGGSNGNGNGGGDNGAGAGSVVALFVRPLFEAMGEQNKGVQAGAAACLAKMVESAGGDGGGGGALVPAFQKICPRICKLLGSPNFLAKAAILPVVSSLSQVGAITPQSLEHLLPSIHDCLTSTDWATRKAAADALSSLALHSRGLVADGAASTVAVLEDCRFDKIKPVRDSMTEALQLWKNIAGKGDGSPDDSKPVSGDGDKSSASPLPETSAKLNLGDRKIDPSAKESPAGTSDVDSTGKAKAAGISEKAVVILKKKAPALSDKELNPEFFQKLERRGSDDLPVEVVLPRRGLNSSSSNNEEESGANAKDSKERNIPNHMLDRGNDRNSKQHSFDDFAPDKRMNAKELRAKAFDTDDRTEIDQREGSSNLAGQSEVSFSNNRGNWLAIQRQLLQLERQQVHLMNMLQDFMGGSHDGMVTLENRVRGLERIVEDMSRDLSISSGRRGSNFTGFEGSSRPSSKYNGFNDYSTAKYGRGGDGRTPFSERFSQADGNALGMRGRGPSWRSDTSEGWDFPGYGASRNGQISTRRAFGGSSVDARSPKSVPEGDQGGSRRAWDKAALPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGTARATRVAIPEMTAEAMADDNVGQDRDAIWTSWSNAMHALQVGDIDSAFAEVLSTADDLLLVKLMDRTGPVIDQLSNEIACEIMPAIGQFLLDQNLHDICFSWIQQLLEIVFDNGPETFGIPMEVKKELLLNLHEASSADTAEEWEGMPPDQLLLQLASAWEIDLQQHDK 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00143 934 MobiDBLite consensus disorder prediction 451 544 - -
Aip01g00143 934 MobiDBLite consensus disorder prediction 349 411 - -
Aip01g00143 934 Coils Coil 922 934 - -
Aip01g00143 934 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 43 934 IPR033337 GO:0005874|GO:0008017
Aip01g00143 934 MobiDBLite consensus disorder prediction 474 533 - -
Aip01g00143 934 Gene3D - 40 169 IPR011989 -
Aip01g00143 934 SMART TOG_3 79 339 IPR034085 -
Aip01g00143 934 MobiDBLite consensus disorder prediction 1 46 - -
Aip01g00143 934 Coils Coil 586 606 - -
Aip01g00143 934 Gene3D - 182 339 IPR011989 -
Aip01g00143 934 SUPERFAMILY ARM repeat 60 860 IPR016024 -
Aip01g00143 934 MobiDBLite consensus disorder prediction 661 723 - -
Aip01g00143 934 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 43 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00143 Aip-Chr1 1477004 1482210 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00143 - - adu:107477481 1641.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00143 01 1477004 1482210 Aip01g00143 01 1477004 1482210 ECH