Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2474 ATGGCTTCTTCTCCTTCACCATTCACCCTCTCATTCTCCTCTTCCGTCTCATCCACATCCCTCCTCCCATGCCGTCGCAGCTTCATTCTCCCAATCCCTCGAGGCCGCGCTACCTCATTCACTGTCCAATCCAAGATCCGAGAAATCTTCATGCCCGCACTCAGCTCCACTATGACTGAGGGCAAAATCGTCTCTTGGATCAAATCCGAGGGCGAGACTCTCTCCAAGGGTGAGAGCGTCGTCGTCGTCGAATCCGACAAAGCTGACATGGACGTCGAGACATTCTACGATGGAATACTCGCCGCCATCGTCGTCCCCGACGGCGAAACAGCCCCCGTTGGAGCTCCCATCGCCTTACTCGCCGAGACGGAGGAAGAAGTCGCCGAAGCCAAAGCCAAAGCTGCCAAGTCATCACAATCCCAATCCTCTGCGCCTCCTCCTCAGCCTGCAAATCCAGCTCCGGCAATTTCTCAGCCTTCTCCTCCTCCTCCTCCTCCGCCATCGGCGGCAGCTTCTGACGGACCGAAGAAGACCGTCGCCACGCCTCAGGCGAAGAAGCTCGCAAAGCAGCACAAGGTAGACCTTGCGTCTCTCACCGGGACTGGTCCGTTTGGTCGGATCACTCCGGCCGACGTGGAGACCGCTGCCGGGATTGCGCCATCAAAGAGCAGTCCTGCTCCGGCGGCTCCTGCTCCGGCGAGCTCAGCTCCTCCAAAAGCAGCTGCTGCTGGTGCAGTGGCGCCGCCTCCAATTCCAGGCTCTAGCGTTGTTACATTCACGACAATGCAATCTGCAGTTGCAAAGAACATGGTGGAGAGCCTCTCCGTGCCTACATTCCGTGTTGGTTATCCTGTGATCACTGATGCACTTGATGCTTTATATGAGAAGGTGAAGCCGAAGGGGGTGACAATGACAGCAATTTTGGCCAAGGCTGCTGCAATGGCACTTGTCCAACATCCAGTGGTCAATGCCAGCTGCAAAGATGGCAAGAACTTTGCCTATAACAGCAACATCAACATTGCAGTTGCTGTGGCAATCAACGGCGGTTTGATTACCCCTGTACTTCAGGATGCCGACAAGTTGGACTTGTATCTGTTGTCCCAAAAGTGGAAAGAGCTAGTTAATAAAGCTCGTGGAAAGCAATTGCAACCCAATGAGTATAATTCAGGAACTTTCACACTCTCCAATCTGGGCATGTTTGGAGTTGACAGGTTTGATGCCATACTTCCTCCAGGGCAGGGGGCTATCATGGCAGTTGGAGCATCAAAGCCTACTGTCGAGGCTGATGCAACTGGATTCTTCAAGGTGAAAAATAAGATGCTGGTGAATGTAACAGCTGATCACCGAATAATTTATGGTGCTGATTTGGCCGCCTTCCTTCAGACATTCTCCAAAATCATTGAAAACCCAGACAGTCTAACATTGTAG 1428 0.5301 MASSPSPFTLSFSSSVSSTSLLPCRRSFILPIPRGRATSFTVQSKIREIFMPALSSTMTEGKIVSWIKSEGETLSKGESVVVVESDKADMDVETFYDGILAAIVVPDGETAPVGAPIALLAETEEEVAEAKAKAAKSSQSQSSAPPPQPANPAPAISQPSPPPPPPPSAAASDGPKKTVATPQAKKLAKQHKVDLASLTGTGPFGRITPADVETAAGIAPSKSSPAPAAPAPASSAPPKAAAAGAVAPPPIPGSSVVTFTTMQSAVAKNMVESLSVPTFRVGYPVITDALDALYEKVKPKGVTMTAILAKAAAMALVQHPVVNASCKDGKNFAYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVNKARGKQLQPNEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVEADATGFFKVKNKMLVNVTADHRIIYGADLAAFLQTFSKIIENPDSLTL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2474 475 Gene3D - 252 474 IPR023213 -
Ahy9g2474 475 SUPERFAMILY Single hybrid motif 45 139 IPR011053 -
Ahy9g2474 475 MobiDBLite consensus disorder prediction 130 192 - -
Ahy9g2474 475 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 255 474 IPR001078 GO:0016746
Ahy9g2474 475 CDD lipoyl_domain 48 120 - -
Ahy9g2474 475 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 9 475 IPR045257 GO:0006086|GO:0045254
Ahy9g2474 475 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 172 215 IPR036625 GO:0016746
Ahy9g2474 475 Gene3D - 41 145 - -
Ahy9g2474 475 ProSiteProfiles Biotinyl/lipoyl domain profile. 46 121 IPR000089 -
Ahy9g2474 475 SUPERFAMILY CoA-dependent acyltransferases 255 474 - -
Ahy9g2474 475 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 71 100 IPR003016 -
Ahy9g2474 475 Coils Coil 120 140 - -
Ahy9g2474 475 Gene3D - 177 216 IPR036625 GO:0016746
Ahy9g2474 475 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 9 475 - -
Ahy9g2474 475 MobiDBLite consensus disorder prediction 217 246 - -
Ahy9g2474 475 Pfam Biotin-requiring enzyme 48 119 IPR000089 -
Ahy9g2474 475 Pfam e3 binding domain 179 213 IPR004167 GO:0016746
Ahy9g2474 475 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 179 216 IPR004167 GO:0016746
Ahy9g2474 475 MobiDBLite consensus disorder prediction 145 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2474 Ahy-Chr9 113838870 113842529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2474 10 475 Acyl Lipid Metabolism Gene Families AT3G25860 75.532 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2474 K00627 - gmx:100813087 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3154 19 154480317 154483991 Ahy9g2474 9 113838870 113842529 hybridization