Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2401 ATGGGAACCGTTCCGATGAACATCGCTTCCCACGTCGACCTCCGTTCACGATTCCACCTCACATCGTCTTCTTCCTCGTCGTCTTCCTCATCCTCCTCTGTGCGGGTTTCCAACTTTTCTAAAACTATCAGCTTGAGCTTCCCTCTCTCTCGGAGGAAGCAGGGGAGGTTAGGTAGGTTTCCTTGCTTCGCCGTCGATGACGACTCCAGACTCCAGCAGCAAGACCTCGCCAATACTACTTCAACTGCTGTCGGCTCTGCCACTGAAGAAAGACCCACCGAAAATACGGATCTGCTTCCTGGTACAAATGGAGATGCTCCAGATAATTTTAAGCAAGATGGCGAAGGAAGTGCTATCTATGATTTCCTTTATCCTAGTAAAGAGCTTCTTCCCGATGATAAAGAAATGAGCATATTTGATCATCTTGAAGAGCTGCGACAGAGAATCTTTGTATCAGTTCTAGCTGTTGGAGGAAGCATTCTCGGATGCTTTGCATTTTCGAAAGATCTGATAGTGCTTCTAGAATCTCCTGTGAAGACACAGGGTGTAAGATTTCTTCAGCTAGGTCCTGGAGAATTTTTCTTTACAACTTTAAAGGTGTCTGGATACTGTGGCCTCCTCTTGGGAAGTCCTGTAATACTGTATGAGATTATAGCCTTTGTACTTCCAGGTCTCACAAAAGCTGAAAGAAAGTTTCTAGGGCCAATTGTATTGGGCTCGTCAGTTCTTTTCTATGCCGGAATAACTTTCTCCTATTTAGTTCTAACACCTGCAGCCTTAAACTTCTTTGTTAATTATGCTGAAGGTGCTGTTGAGTCGTTATGGTCTATTGATCAATACTTTGAGTTTGTCCTCGTCCTTATGTTCAGCACAGGCTTATCTTTCCAGGTACCTGTTATACAATTCCTATTGGGACAACTTGGGTTGGTGTCTGGAGACCAGATGCTATCAGTTTGGAGATATGTTGTGGTTGGAGCAGTGGTGGCCGCTGCTGTTGTTACACCCTCCACTGATCCACTCACTCAAGTTCTTCTAGCTGCACCTTTGTTGGGTCTTTACCTAGGTGGTGCATGGGCTGTCAAGCTTACAGGACGGTGA 1098 0.4545 MGTVPMNIASHVDLRSRFHLTSSSSSSSSSSSSVRVSNFSKTISLSFPLSRRKQGRLGRFPCFAVDDDSRLQQQDLANTTSTAVGSATEERPTENTDLLPGTNGDAPDNFKQDGEGSAIYDFLYPSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGGSILGCFAFSKDLIVLLESPVKTQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTKAERKFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLGLYLGGAWAVKLTGR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2401 365 MobiDBLite consensus disorder prediction 78 109 - -
Ahy9g2401 365 TIGRFAM tatC: twin arginine-targeting protein translocase TatC 138 353 IPR002033 GO:0016021
Ahy9g2401 365 ProSitePatterns TatC family signature. 280 299 IPR019820 -
Ahy9g2401 365 Pfam Sec-independent protein translocase protein (TatC) 140 348 IPR002033 GO:0016021
Ahy9g2401 365 MobiDBLite consensus disorder prediction 78 102 - -
Ahy9g2401 365 Hamap Sec-independent protein translocase protein TatC [tatC]. 133 365 IPR002033 GO:0016021
Ahy9g2401 365 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 58 365 IPR002033 GO:0016021
Ahy9g2401 365 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC-LIKE 58 365 - -
Ahy9g2401 365 PRINTS Bacterial Sec-independent translocation TatC protein family signature 280 308 IPR002033 GO:0016021
Ahy9g2401 365 PRINTS Bacterial Sec-independent translocation TatC protein family signature 229 255 IPR002033 GO:0016021
Ahy9g2401 365 PRINTS Bacterial Sec-independent translocation TatC protein family signature 211 229 IPR002033 GO:0016021
Ahy9g2401 365 PRINTS Bacterial Sec-independent translocation TatC protein family signature 137 164 IPR002033 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2401 Ahy-Chr9 112824442 112827389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2401 K03118 - gmx:100801670 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3240 19 155574490 155577368 Ahy9g2401 9 112824442 112827389 hybridization