Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2282 ATGATGATGCTGAGAGTCAGATCCATGGAATCCAAAGAAACCCTAAAGATCGACATCCCCGGTTGCTGGTCATTGCAGCAACTCAAAGACACCATTTCACATGTCATCTCATCATCTTCATCTTCTTCTCTTCATCTATCCCTCAACAGGCGGGACGAAATCCACGCTTCCTCGCCGGACGACTCCATCAAATCTCTAGGCATCGCCTATGGAGACCTCGTCTTCTACACCTTCAACCCCACCGCCTTCTCCCCCGAAACTCAAACCCTCCTTCACAAACCCACCCCACAAGAACCATTCAATTCATGTGACGTGCCCTCGATTCAACACTCTTCTGAAATCCTCATGGTTGACGCTCCCTCGATTCCCGAGGCGGAAAAGCTTCCGTCTTTGGAGTCTTCAGCTGCGGAAACCGTCGATATGGCTGATGGGTCTGGTGGAGAGGAAGTGGTTGTCAGGAAGACCAATTCCGAAGCTTCGTTCTTCAAAAGGGTGTTGAAAGAAGCGAATGGAAATGACGTTACCGACCTCAAGTTGTTGGTTCTCGCGGTACATGCTGTTATTCTGGAATCTGGGTTCGTTCGTGCTGATAAGATTTCGCCTTTGTCGGTTGGTTCCTCTCCTATTCTGGATGAGTGGCCTTCAGCTTCAGCTTCTTCGATATCGTTGAGGTATACTCTGCCTGAGATTCTAACTAGTGATTCTGGTGTTTCGCGTACTGTGTTATTGAAATTTCAGACATTAGGGCATCTTGTGAATGTTTATGGGTCTTTGTTTGATGATGCTGGGTCGGAGGTCCATAGGGTGTCTTTGGATAAGCGTAAATTTGCCAAGCCCTTGAAGTTGATGCTGGAAAATTTTGAATCCAAGGATAATCTTGATGATGATGCTGTTGTTGATCAACAAAGTGAGATTTTTGAGTTGTGGAAGATGGTGAAGGATAGGCTTGCATTGCCATTATTGATTGATCTTTGTGACAAAGCTGGATTGGATCCTCCACCGTGTTTTATGAGGCTCCCCACAGAACTTAAGATCATGATTTTGGAGCGTCTTCCTGGTGTTGATGTGGCAAGGATGGCTTGCTTGTGTACAGAACTGGAATACCTGTCTGGCAATAATGACCTCTGGAGGAAGAAGTTTGAGGAGGAGTTTGGAGTTGATGGGCGTAGAGCGGTGTTCTTTAAGGAGTTATTTGCTTTACACTGGGGAACAAGGAAGAGATCGATGCGACCGGTTTTTCCTATTCAAATGAGGCAACGACCTTATGCATTATTCCCAGCAAGGAGGGACCGTAATCCTTTTGGAATACCTTCAATTGTGGGTGGAGACTATGATCGGCTCCCAGGATTCGGTCAACAATTCCCTACATACTCACCAAGGCGGACTTTCCTCCCACCGTGTCACCGTGGAGGATTCCATCACTAG 1425 0.4688 MMMLRVRSMESKETLKIDIPGCWSLQQLKDTISHVISSSSSSSLHLSLNRRDEIHASSPDDSIKSLGIAYGDLVFYTFNPTAFSPETQTLLHKPTPQEPFNSCDVPSIQHSSEILMVDAPSIPEAEKLPSLESSAAETVDMADGSGGEEVVVRKTNSEASFFKRVLKEANGNDVTDLKLLVLAVHAVILESGFVRADKISPLSVGSSPILDEWPSASASSISLRYTLPEILTSDSGVSRTVLLKFQTLGHLVNVYGSLFDDAGSEVHRVSLDKRKFAKPLKLMLENFESKDNLDDDAVVDQQSEIFELWKMVKDRLALPLLIDLCDKAGLDPPPCFMRLPTELKIMILERLPGVDVARMACLCTELEYLSGNNDLWRKKFEEEFGVDGRRAVFFKELFALHWGTRKRSMRPVFPIQMRQRPYALFPARRDRNPFGIPSIVGGDYDRLPGFGQQFPTYSPRRTFLPPCHRGGFHH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2282 474 ProSiteProfiles F-box domain profile. 333 379 IPR001810 GO:0005515
Ahy9g2282 474 Gene3D - 337 418 - -
Ahy9g2282 474 Gene3D - 159 336 - -
Ahy9g2282 474 Pfam F-box domain 336 378 IPR001810 GO:0005515
Ahy9g2282 474 PANTHER F-BOX PROTEIN SKIP22 2 473 - -
Ahy9g2282 474 SMART fbox_2 339 379 IPR001810 GO:0005515
Ahy9g2282 474 PANTHER F-BOX PROTEIN SKIP22 2 473 - -
Ahy9g2282 474 Gene3D - 1 77 - -
Ahy9g2282 474 SUPERFAMILY F-box domain 329 390 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2282 Ahy-Chr9 111784390 111786862 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2282 K10293 - gmx:100796338 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3354 19 156466992 156468883 Ahy9g2282 9 111784390 111786862 hybridization