Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1077 ATGGCTCCTGCTATCACTACCCTCACTGCACCCAAAGCCACCGTTGTCAATGGCCGCACCGCTGGTAACCGTGCCTTTGTGACGTTCCTTGCCGGGAACGGTGACTATGTGAAAGGTGTTGTAGGGTTGGCAAAGGGTCTCAGAAAAACGAAAACAATGTACCCTCTTGTTGTTGCAGTGCTACCTGATGTTCCTGAAGAGCACAGAAAGATTCTGATATCTCAAGGGTGCATTGTTAGGGAGATTGAGCCTGTGTATCCACCTGAGAACCAGACACAGTTTGCTATGGCGTATTATGTCATCAACTACTCCAAGCTTCGTATTTGGGAGTTTGTGGAGTATAGCAAGATGATATATCTAGACGGTGACATTCAAGTGTTTGAGAACATTGACCACCTCTTTGACTTGCCGGATAATTACTTCTATGCTGTGATGGACTGTTTTTGTGAACCAACTTGGGGCCACACCTCCCAGTACAAGATCGGTTATTGCCAGCAATGCCCTGATAAGGTTCAATGGCCTAAGGACTTTGGTCCGAAGCCCCCACTTTATTTCAATGCTGGCATGTTCGTTTATGAACCAAATCTTGTTACCTATCATGACCTTCTTAAAACACTTCAAGTCACAAAACCTACATCCTTTGCAGAGCAGGGGTCTAAACCATGGAGGTATACTGGGAAGGAAGATAACATGGATAGAGAAGACATCAAGATGCTGGTGAAGAAATGGTGGGATATATATGAAGATGAGACTCTGGATTTCAATCATCCCGTCAATTCAGAAAGGTTTAAGATGGCTATTTTGGAGTCTGGTGGTGAAATCAAGTTTGTTCCCGCACCATCCGCAGCATAG 852 0.4507 MAPAITTLTAPKATVVNGRTAGNRAFVTFLAGNGDYVKGVVGLAKGLRKTKTMYPLVVAVLPDVPEEHRKILISQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDNYFYAVMDCFCEPTWGHTSQYKIGYCQQCPDKVQWPKDFGPKPPLYFNAGMFVYEPNLVTYHDLLKTLQVTKPTSFAEQGSKPWRYTGKEDNMDREDIKMLVKKWWDIYEDETLDFNHPVNSERFKMAILESGGEIKFVPAPSAA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1077 283 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 219 IPR029044 -
Ahy9g1077 283 CDD GT8_Glycogenin 24 249 - -
Ahy9g1077 283 Pfam Glycosyl transferase family 8 28 209 IPR002495 GO:0016757
Ahy9g1077 283 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 217 - -
Ahy9g1077 283 PANTHER GLYCOGENIN SUBFAMILY MEMBER 218 283 - -
Ahy9g1077 283 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 251 IPR029044 -
Ahy9g1077 283 PANTHER GALACTINOL SYNTHASE 2 218 283 - -
Ahy9g1077 283 PANTHER GALACTINOL SYNTHASE 2 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1077 Ahy-Chr9 22668900 22670528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g1077 1 283 Glycosyltransferase AT1G56600 61.834 1.87e-146 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1077 K18819 - gmx:100804007 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0871 16 15632568 15634680 Ahy9g1077 9 22668900 22670528 PCT
Ahy9g1077 9 22668900 22670528 Ahy16g0871 16 15632568 15634680 PCT