Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0998 ATGGCATTATTCTCATTCTCCTCACTCTGCCTCACAATTTTTGTCATCTATTCTTCTTTATCTCTATCTGCTGAATCACGTGTCTCACCAATTGCACCAATCTCTTCTCTTATTAGCAAAACCCTTTTCGACTCAATTTTTTTACATAAAGATGACAATGCTTGCCCTGCTAGAAACTTTTACACTTATGAATCCTTCGTTGAGGCAACCTCGAGCTTCCCCGCGTTCGGCTCGACCGGATGCTCGGCCACACGGAAGCGCGAGGTTGCCGCATTTCTTGCACAGATCTCACATGAAACCACAGGTGGTTGGGCTACTGCACCTGATGGACCATATGCTTGGGGGCTGTGCTTCAAGGAAGAAGTTAGTCCTCAAAGTGATTATTGTGATTCCTCCAACAAAGAATGGCCCTGTTATCCTGGAAAGAGTTACAACGGCAGAGGACCAATTCAACTTTCCTGGAATTACAACTATGGGCCAGCAGGGAAGGCCTTGGGATTCGATGGTCTTAAGAACCCAGACATTGTGTCAAACAATTCAGTAATTGCATTCAAAACAGCACTCTGGTTTTGGATGACAGAGCAGAAACCAAAACCTTCTTGCCACAACGTCATGGTTGGGAATTACGTGCCAACAGCATCTGATAGAGCAGCAAATAGAACCTTAGGGTTTGGGTTGGTTACTAACATAATCAATGGTGGACTTGAATGTGGAGTTCCAGATGATGCAAGAGTCAATGATCGGATTGGGTACTTTCAAAGATATGCTAAGTTGTTTAATGTAGATACTGGACCTAACTTGGATTGTGCATATCAGAAATCCTTCTAA 828 0.4372 MALFSFSSLCLTIFVIYSSLSLSAESRVSPIAPISSLISKTLFDSIFLHKDDNACPARNFYTYESFVEATSSFPAFGSTGCSATRKREVAAFLAQISHETTGGWATAPDGPYAWGLCFKEEVSPQSDYCDSSNKEWPCYPGKSYNGRGPIQLSWNYNYGPAGKALGFDGLKNPDIVSNNSVIAFKTALWFWMTEQKPKPSCHNVMVGNYVPTASDRAANRTLGFGLVTNIINGGLECGVPDDARVNDRIGYFQRYAKLFNVDTGPNLDCAYQKSF* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0998 275 Gene3D - 41 275 - -
Ahy9g0998 275 ProSitePatterns Chitinases family 19 signature 2. 182 192 IPR000726 GO:0004568|GO:0006032|GO:0016998
Ahy9g0998 275 PANTHER OS05G0138200 PROTEIN 10 275 - -
Ahy9g0998 275 PANTHER CHITINASE-RELATED 10 275 - -
Ahy9g0998 275 PIRSF Endochitinase 7 275 IPR016283 GO:0004568|GO:0005975
Ahy9g0998 275 Pfam Chitinase class I 37 269 IPR000726 GO:0004568|GO:0006032|GO:0016998
Ahy9g0998 275 Gene3D Endochitinase, domain 2 120 178 - -
Ahy9g0998 275 CDD chitinase_GH19 38 269 - -
Ahy9g0998 275 ProSitePatterns Chitinases family 19 signature 1. 55 77 IPR000726 GO:0004568|GO:0006032|GO:0016998
Ahy9g0998 275 SUPERFAMILY Lysozyme-like 34 275 IPR023346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0998 Ahy-Chr9 19675088 19676968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0998 13 275 Glycoside Hydrolase AT4G01700 74.717 7.83e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0998 - - gmx:100785397 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0797 16 14262675 14264326 Ahy9g0998 9 19675088 19676968 PCT
Ahy6g0545 6 6699597 6701173 Ahy9g0998 9 19675088 19676968 PCT
Ahy9g0998 9 19675088 19676968 Ahy16g0797 16 14262675 14264326 PCT
Ahy9g0998 9 19675088 19676968 Ahy6g0545 6 6699597 6701173 PCT