Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0950 ATGGTGGTGGCTTCTTCGATGATGATAAGGACGAAGAAAACAAAGGCGGTTGGGATTCCAACAATTGACCTCTCAATGGAGAGGGCAGAGTTGTCAAAGCAAGTGGTGAAGGCTTGTGAGGAATATGGATTCTTCAAAGTGGTGAATCATAGTGTGGGTAAAGAGGTCATTTCGACATTGGAAGAGCAAGGGGCTGAGTTTTTCGCCAAAACCGCCGCTGAAAAACACCGTGCCGGCCCTGCCACCCCCTTTGGCTACGGCTGCAGAAATATTGGTCCTAATGGCGACATGGGTGACCTTGAGTACCTTCTTCTCCACACAAATCCTCTCAACATCTCTGACAGATCCAAAACCATTTCCAATGACCCTATCAAATTCAGTTGCGCAGTAAACGATTACATAGAATCAACGAGGGAGCTAGCATGTGAGATTCTTGATCTAGTGGGTGAAGGTCTACGGCTCCAAGATAAGTACTCACTAAGCAAGCTAATCAGAGACGTTCAAAGTGATTCGCTCCTTCGGATCAACCACTACCCTCAGATGGTGAAACCGAAGTCGTGGGACCCATCATTGATGAAGGGGAACAGCAATAGCAGCATTGGGTTTGGAGAGCATTCTGACCCTCAGATCTTGACGATCCTACGGTCCAACAACGTTGGTGGGCTTCAGATCTCAACTCATGACGGGCTGTGGATCCCTGTCCCCCCGGACTCTAACGAATTCTTCGTTATGGTCGGCGATGCACTCCAGGTATTGACAAATGGAAGGTTTACAAGCGTGAGACACAGAGCATTGACAAACCCATTGAAGTCAAGAATGTCAATGATGTATTTTGCAGCACCACCGCTGAATTGGTGGATCACACCACTGCCTAAGATGGTGACACCTCACAACCCAACCCTTTATAAGCCTTTCACTTGGGCCCAATACAAACAAGCTGCTTACTCTTTGAGATTGGGTGCCTCTCGCCTTGACCTCTTCAAGCTCCACCAACAACAAGATTCCAATCTTGCCCCTCCTTCACCCTAA 1029 0.4801 MVVASSMMIRTKKTKAVGIPTIDLSMERAELSKQVVKACEEYGFFKVVNHSVGKEVISTLEEQGAEFFAKTAAEKHRAGPATPFGYGCRNIGPNGDMGDLEYLLLHTNPLNISDRSKTISNDPIKFSCAVNDYIESTRELACEILDLVGEGLRLQDKYSLSKLIRDVQSDSLLRINHYPQMVKPKSWDPSLMKGNSNSSIGFGEHSDPQILTILRSNNVGGLQISTHDGLWIPVPPDSNEFFVMVGDALQVLTNGRFTSVRHRALTNPLKSRMSMMYFAAPPLNWWITPLPKMVTPHNPTLYKPFTWAQYKQAAYSLRLGASRLDLFKLHQQQDSNLAPPSP* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0950 342 Pfam 2OG-Fe(II) oxygenase superfamily 170 280 IPR044861 -
Ahy9g0950 342 Gene3D - 3 318 IPR027443 -
Ahy9g0950 342 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 4 330 - -
Ahy9g0950 342 PRINTS Isopenicillin N synthase signature 241 267 - -
Ahy9g0950 342 PRINTS Isopenicillin N synthase signature 35 52 - -
Ahy9g0950 342 PRINTS Isopenicillin N synthase signature 205 226 - -
Ahy9g0950 342 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 83 IPR026992 -
Ahy9g0950 342 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 168 289 IPR005123 -
Ahy9g0950 342 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 4 330 - -
Ahy9g0950 342 SUPERFAMILY Clavaminate synthase-like 10 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0950 Ahy-Chr9 18299266 18305753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0950 10 329 Glycosyltransferase AT5G59530 26.727 7.30e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0950 K04125 - gmx:100779525 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1216 19 23133299 23140073 Ahy9g0950 9 18299266 18305753 hybridization
Ahy16g0745 16 13494030 13501598 Ahy9g0950 9 18299266 18305753 PCT
Ahy9g0950 9 18299266 18305753 Ahy16g0745 16 13494030 13501598 PCT