Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0580 ATGTGTTCACTCACAACACCAGCCTCAACCTCCCTCTCCTTCTTCTCTTCTTCTATCTTTTTCAACAATACCAAAATCCCCAAACTACACTCACCATCAAAACCCTTCTCTCACTCTCTCTCCGTCGCGTGCAAAGCCGCAACCCTACCGCTTCTCTCATTTTCCGGCGACAAAATCGGCGAAGCGCAACTCGACCTCCGCGCCGCCCCACCCGACACCGCACGCGCCGTCGTCCACCGGGCAATCATCACCGACCTCCAAAACAAGCGCCGTGGCACCGCCTCAACCCTAACGCGGGCCGAGGTTCGCGGCGGAGGGAGAAAACCCTATCCGCAGAAGAAGACCGGCCGGGCCCGCAGGGGGTCAAACAGGACACCGCTCAGGCCCGGCGGAGGTGTCATTTTCGGGCCCAAGCCCAGGGACTGGAGCATCAAAATAAACAGGAAGGAGAAGAGGCTTGCGATTTCCACCGCGATGGCGAGCGCGGCGGTGAACACGTTCGTGGTCGAGGACTTCGCGGAGGAGTTTCAGGGGAAGCCGAAGACGAAGGAGTTCATTGCGGCGATGAAGCGGTGGGGACTGGACCCTAAGGAAAAGGCCATGTTCTTGATGATGGAGGTGCCGGAGAACGTTGTGCTTTCGAGCCGGAACATTGGGACGGTGAAGGTTTTGACGCCGAGGACGCTGAATTTGTTTGATATTTTGAATGCTGATAAGCTTGTGCTTACACCTGCTGCTGTGGATTACTTGAATAAGAGGTATGGGGTTGATTACCAGGGCGGTGATGATGAAGATGAAGAAGAAGAAGAAGAAGAAGATTATGAAGATGAAGGAGTAGCAGAAGAAGGATCTGAAACAAACAAGGAGGATAGTTCTGATGTGGTAAACTGA 891 0.5421 MCSLTTPASTSLSFFSSSIFFNNTKIPKLHSPSKPFSHSLSVACKAATLPLLSFSGDKIGEAQLDLRAAPPDTARAVVHRAIITDLQNKRRGTASTLTRAEVRGGGRKPYPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSIKINRKEKRLAISTAMASAAVNTFVVEDFAEEFQGKPKTKEFIAAMKRWGLDPKEKAMFLMMEVPENVVLSSRNIGTVKVLTPRTLNLFDILNADKLVLTPAAVDYLNKRYGVDYQGGDDEDEEEEEEEDYEDEGVAEEGSETNKEDSSDVVN* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0580 296 MobiDBLite consensus disorder prediction 260 283 - -
Ahy9g0580 296 PANTHER 50S RIBOSOMAL PROTEIN L4 6 270 IPR013005 -
Ahy9g0580 296 Gene3D - 33 261 IPR023574 GO:0003735|GO:0005840|GO:0006412
Ahy9g0580 296 SUPERFAMILY Ribosomal protein L4 48 255 IPR023574 GO:0003735|GO:0005840|GO:0006412
Ahy9g0580 296 Hamap 50S ribosomal protein L4 [rplD]. 54 255 IPR013005 -
Ahy9g0580 296 MobiDBLite consensus disorder prediction 257 296 - -
Ahy9g0580 296 Pfam Ribosomal protein L4/L1 family 74 252 IPR002136 GO:0003735|GO:0005840|GO:0006412
Ahy9g0580 296 TIGRFAM rplD_bact: 50S ribosomal protein uL4 74 251 IPR013005 -
Ahy9g0580 296 MobiDBLite consensus disorder prediction 101 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0580 Ahy-Chr9 8143742 8146069 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0580 K02926 - gmx:100803701 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0708 19 9805282 9808028 Ahy9g0580 9 8143742 8146069 hybridization