Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0496 ATGATTGAGGGCTTCGACCAGTGCAATTCGATGTTGTGCTGGGAAGACGAAGCTGAAATGCCAAAAGTTGAATTTCAGGAATCTGGTCCTGCTTTGAAGAAAGCCAAGAAAACCATTTTGGCTGCTGAAAATGTCGACAGCTATGAAGTGGCTGAAAGCCAGGACAGACTTGGTGACTTACCGGATTGCCTTATACATCATATATTGTCGTTTATGGAAACGAAGGATGCGATTCGAACATGTGTTTTATCTAAAAGGTGGAGGTATATTTGGGCTTCAGTTCCCTGCTTGAACTTCAGCAGCAAGTCATTCAATCGGTTGGTTGATTTCAAGAAATTTGTGTTGTGGGTTCTATCCCATCGGGATGATTCTCAGGTCAAGGTTCTTATTTACTATCGCTTCGGGGTGGATTACGCAACGGATCAGTATCTGTTGAATAAGGTTATTGAATATGCAACATATCATGGTGTTGAAGAAATCAGAATCAATCTTCGGGCTAAAACCTCTGGCAGCCCACCTGTTGAAATCCCTTTGCCTCTATTTACTTGTCAGTCTTTGAAACGGCTCGAGTTAAAAGATTGCAATCCTACAAATGTCTCGTCCCCCGTTGGCTGCAAGTCATTGGAAACGTTGCACCTGGAACATTTTTCAATGTATCCTGCTGCAGCTGACTTTATGAATCCATTTTCAAGTTTGGCGGAACTCTTTGGTTTTACAACATTGACGACTTTGCACCTTAACAGCTTCACTCTGTGTTATACAGGAATTGACTGTCTCAACCCATTTGCTACATGTGTCAATTTGAAGAATTTGCACTTAGGTGAAATGTCCTTTAAGTCCGATTTGAACCCTAAGGATTTTGTTATATCTGCTCCCAAACTCAAAAACTTGAGCCTAATGTGCAACCGCTTCAAATGTAAGATTGTAGTTGCTGCACCAACTCTTACCAATTTCAGCTACTTGTATTCTACATCTTGTGCCTTCTTTGAGTTCAGTCTTCCATCTTTGGATGGCTTGGTCATTGATATTCATGAACCGCGTGATCAATTGGAAAAATCAATCCGGAGGAAGAGAGAGGAGACTTTGCATGGTTTGATCAATATGATACGGGGACATTGTAAATCTGAAGCAGTTAAACTATCATTCTGTACAGTAGCGGTTTCCTGTGGTACTGCAGTTTTTCTAAAGCCAGAGTTTTACTCCTGTAGTAAATTGAAATCATTGAACTTCGGGGTGGGTTCAACATACAAAATCTTCATTAGCAACCTTGACAATATAACGGCCTACTTCCGCGATTGCTCTCAACATGCAGATTTTGAAATCCTGACTATTTAG 1335 0.4097 MIEGFDQCNSMLCWEDEAEMPKVEFQESGPALKKAKKTILAAENVDSYEVAESQDRLGDLPDCLIHHILSFMETKDAIRTCVLSKRWRYIWASVPCLNFSSKSFNRLVDFKKFVLWVLSHRDDSQVKVLIYYRFGVDYATDQYLLNKVIEYATYHGVEEIRINLRAKTSGSPPVEIPLPLFTCQSLKRLELKDCNPTNVSSPVGCKSLETLHLEHFSMYPAAADFMNPFSSLAELFGFTTLTTLHLNSFTLCYTGIDCLNPFATCVNLKNLHLGEMSFKSDLNPKDFVISAPKLKNLSLMCNRFKCKIVVAAPTLTNFSYLYSTSCAFFEFSLPSLDGLVIDIHEPRDQLEKSIRRKREETLHGLINMIRGHCKSEAVKLSFCTVAVSCGTAVFLKPEFYSCSKLKSLNFGVGSTYKIFISNLDNITAYFRDCSQHADFEILTI* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0496 444 Gene3D - 43 97 - -
Ahy9g0496 444 PANTHER F-BOX PROTEIN-LIKE 41 444 - -
Ahy9g0496 444 PANTHER CYCLIN-LIKE F-BOX 41 444 - -
Ahy9g0496 444 SUPERFAMILY L domain-like 174 332 - -
Ahy9g0496 444 Gene3D Ribonuclease Inhibitor 147 340 IPR032675 -
Ahy9g0496 444 Pfam F-box domain 59 94 IPR001810 GO:0005515
Ahy9g0496 444 SUPERFAMILY F-box domain 53 111 IPR036047 GO:0005515
Ahy9g0496 444 SMART fbox_2 60 100 IPR001810 GO:0005515
Ahy9g0496 444 ProSiteProfiles F-box domain profile. 54 107 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0496 Ahy-Chr9 6575301 6579674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0496 50 218 EF-hand Containing Proteins AT5G41840 32.632 5.90e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0496 - - vun:114167379 706.057