Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0485 ATGTATCGATTAGCTTACAAGCTAGCCTCCTCCATCACTTCCTCAACCTCAAAGAACGTTATACGCTGCAGGGTTATTTCAAGTAGAAACTATGCGAGCAAAGACATCAACTTTGGCGTCGGAGCTCGTGCTGCAATTCTTCAGGGTGTCACTGAGGTTGCTGATGCTGTCAAGGTTACGATGGGACCTAAGGGTCGTAATGTGATTATTGAGAAAAGTTATGGGAACCCAAGGATCACAAAGGATGGTGTGACAGTAGCTAAGAGTATCAAATTTCAGGATAAGGCTAAGAACATTGGTGCTGATCTTGTTAAGCAGGTTGCCAAGGCTACCAACGCTGCTGCTGGAGATGGTACAACTTGTGCGACTGTGTTAACTCAGGCAATACTGATAGAAGGTTGCAAATCGATTGCAGCTGGTGTAAATGTCATGGATTTGCGCAATGGAATAAATAAGGCAGTTGATGCTGTAATTACTGATTTGAAAAGCAGGGCAGTAATGATAAGCACACCTGAAGAGATAACCCAGGTTGGGACTATATCTGCAAATGGAGAGAGAGACATTGGTGAATTGATTGCAAAGGCAATGGAAAAAGTTGGGAAGGAAGGAGTTATTACTGTTGCTGATGGAAACACTTTGGACAATGAGTTGGAAGTTGTTGAAGGAATGAAGTTGGGCAGAGGCTATATATCTCCCTATTTTATTACTGATCAGAAAACCCAGAAATGTGAATTGGATCACCCCCTTATCCTCATCCATGACAAGAAAATTTCAGACATGAATTCATTATTGAAAATATTGGAACTGTCAGTTGAGAAAAAAAGACCGCTCTTGGTTGTAGCAGAAGATGTTGAGAGTGATGCATTGGCTATGCTCATACTAAACAAGCATCATGCTGGGCTTAAGGTTTGTGCTATAAAAGCTCCTGGTTTCGGTGATAACAGAAAAGCAAATCTAGATGATCTTGCAATTCTTACTGGAGGAGAGGTCATCACAGAAGAGCGTGGTTTTACTCTTGACAAAGTCCTACCAGAAATGCTTGGTACTGCCAAAAAGGTTACTATCTCCATTGATGACACTATCATTCTACATGGAGGTGGGGATAAGAAACTCATTGAAGAGAGATGTGAGGAGCTTAGGACAGCAATGAACAAGAGTTCTGCCACGTTCGATAAAGAAAAAGCACAAGAACGCCTATCAAAACTATCCGGTGGTGTAGCTGTCTTCAAGGTTGGAGGGGCTAGTGAGGCAGAAGTTGGGGAAAGGAAAGATCGGGTGACAGATGCCCTAAATGCCACTAAAGCAGCAGTCGAGGAGGGAATTGTTCCAGGTGGTGGAGTTGCTCTCTTATATGCTACAAAAGTGTTGGAGAACCTCGAAACAAAGAACGAGGATGAGAAAAGAGGAGTACAGATTATTCAGAATGCACTTAAGGCACCTACCCTTACAATAGCTTCAAATGCTGGTTTCGATGGCACTTTGGTTCAGAGCAAATTGTTAGAACAAGACAATCATAATTTGGGTTTTGATGCTTCTAAAGGTGCCTATGTTGATATGGTAAAGGCTGGAATCATAGATCCTGTTAAAGTTGTTAGAACGGCTTTGGTAGATGCTGCCAGTGTCTCATTGCTACTGACAACAACGGAGGCAGCTATTGTGGATAATCCAAAGGACAAAAATAAAGCTCCCAGCCGGGTGCCCGATATGGATGCCTTGGTTATCTAA 1725 0.4261 MYRLAYKLASSITSSTSKNVIRCRVISSRNYASKDINFGVGARAAILQGVTEVADAVKVTMGPKGRNVIIEKSYGNPRITKDGVTVAKSIKFQDKAKNIGADLVKQVAKATNAAAGDGTTCATVLTQAILIEGCKSIAAGVNVMDLRNGINKAVDAVITDLKSRAVMISTPEEITQVGTISANGERDIGELIAKAMEKVGKEGVITVADGNTLDNELEVVEGMKLGRGYISPYFITDQKTQKCELDHPLILIHDKKISDMNSLLKILELSVEKKRPLLVVAEDVESDALAMLILNKHHAGLKVCAIKAPGFGDNRKANLDDLAILTGGEVITEERGFTLDKVLPEMLGTAKKVTISIDDTIILHGGGDKKLIEERCEELRTAMNKSSATFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATKAAVEEGIVPGGGVALLYATKVLENLETKNEDEKRGVQIIQNALKAPTLTIASNAGFDGTLVQSKLLEQDNHNLGFDASKGAYVDMVKAGIIDPVKVVRTALVDAASVSLLLTTTEAAIVDNPKDKNKAPSRVPDMDALVI* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0485 574 Gene3D GroEL 222 403 IPR027409 -
Ahy9g0485 574 Gene3D - 167 440 IPR027410 -
Ahy9g0485 574 Hamap Chaperonin GroEL [groEL]. 32 572 IPR001844 GO:0042026|GO:0140662
Ahy9g0485 574 SUPERFAMILY GroEL-intermediate domain like 168 234 IPR027410 -
Ahy9g0485 574 TIGRFAM GroEL: chaperonin GroL 33 557 IPR001844 GO:0042026|GO:0140662
Ahy9g0485 574 PANTHER CHAPERONIN CPN60-2, MITOCHONDRIAL 23 568 - -
Ahy9g0485 574 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 23 568 - -
Ahy9g0485 574 SUPERFAMILY GroEL apical domain-like 214 406 IPR027409 -
Ahy9g0485 574 SUPERFAMILY GroEL equatorial domain-like 37 552 IPR027413 -
Ahy9g0485 574 PRINTS 60kDa chaperonin signature 298 321 IPR001844 GO:0042026|GO:0140662
Ahy9g0485 574 PRINTS 60kDa chaperonin signature 57 83 IPR001844 GO:0042026|GO:0140662
Ahy9g0485 574 PRINTS 60kDa chaperonin signature 113 140 IPR001844 GO:0042026|GO:0140662
Ahy9g0485 574 PRINTS 60kDa chaperonin signature 428 449 IPR001844 GO:0042026|GO:0140662
Ahy9g0485 574 PRINTS 60kDa chaperonin signature 380 405 IPR001844 GO:0042026|GO:0140662
Ahy9g0485 574 Coils Coil 456 476 - -
Ahy9g0485 574 ProSitePatterns Chaperonins cpn60 signature. 435 446 IPR018370 GO:0005524|GO:0006457
Ahy9g0485 574 Pfam TCP-1/cpn60 chaperonin family 53 555 IPR002423 GO:0005524
Ahy9g0485 574 Gene3D - 36 553 IPR027413 -
Ahy9g0485 574 CDD GroEL 34 554 IPR001844 GO:0042026|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0485 Ahy-Chr9 6424466 6429712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0485 K04077 - gmx:100778935 978.008