Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0322 ATGCAAATCCAAATGGCTTCCGTGCCCTTCTTCTCTCGTTTCCATTTGCTTCCTTCAAACCAATCATCATTTCCACATTCAACCTTTCACCTTCACCTTCACAACCCACAACACCCATTCATCACCAATGCAAACCCCTCTTCTTCTGATCACAAAGCTCAAGACTTTGCCACAAACCCAGTCCAGGGAATCGGTGGCTCTCCGAAGAAGAAGAAGGCCAAGGAGAAGGTTCACTGGGTTTGCAGCAATTGCGGCTACAGTGCAGGGCAATGGTGGGGTGTGTGTAGATCATGTGGTGAAGCTGGAACCATGAAAGAGTTTCATGAAACCAAAGGAAGTGACAACAAGGTGAGTGGTTTTGCTGTTATGGATGGTGCTGTTGGGCCATGGCTACCTCACCAGGAAGAAACTCAGTTGCGTCCATTGAGATTGGCTGAGGTCAATAGAGGTCTTGATCAGCTTCATTGGAGGATTCCATTAAACGGTCCTTGTGGAAATGAAGTTTCTAGAGTGCTTGGTGGAGGCCTTGTACCAGGCTCTTTGACTTTAGTTGGTGGCGATCCTGGAGTCGGGAAAAGTACTCTGCTGCTGCAGATTGCTGCAATGATCACAGAAGAGTGCAATGATAGCGAAGCATCTCCAGTTGTGTACGTCTCTGGTGAAGAGAGTGTTGAGCAAATAGGCAATAGGGCGGATCGCCTTGGCATTACAGAAGACATTTATTTATATTCAAGTAATGATATTGAGGATATATTGAAAAAAGTTCAGTATCTCTCCCCTCGGGCTCTGGTTATTGATTCAATACAAACTGTTTATTTGAAAGGAATAATGGGAAGTCCTGGAGGGATTATGCAGGTGAAAGAATGCACTTCAACTTTGCTGCGATTTGCAAAGACAACAAACATCCCCGTTCTTTTGATTGGCCATGTGACTAAATCTGGAGACATAGCTGGACCTCGTGTCTTGGAGCATATTGTAGACGTTGTTCTGTATATGGAAGGGGAGAAGTACTCCACCCATCGTATGCTTCGAGCTGTGAAAAATCGATTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCAAATGCGAGTGAAATGTTTCTCAGTGAGCAACATTTAGATTCGGAAATATTAGCGGGGCTAGCTGTTGCTGTGATAATGGATGGCTCCCGAACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGCTCAACTGGTTCAAGGCAAGTTAATGGGATCCATGCAAATAGAGCTGATATGATCATATCTGTTCTTATAAAGCAAGCAGGTCTTCGCCTACAAGAAAATGCTGTGTTTTTGAATGTTGTTAGTGGGTTGACACTTACTGAGACTGCAGGAGATCTTGCAATAGCAGCTGCGATTTGTAGCAGTTTCTTGGAGGTCCCAATACCAAATGACATTGCATTCATCGGTGAAATTGGACTTAGTGGCGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATACACGGTAGCCAAATTGGGTTACAGAATGTGCATAGTGCCAAAAACAGCTGAAAAAACTTTAGGAAATGAAGGTCTAGAAAAGATGACACTTGTGGGTTGCAGGAATCTGAAAGAAGTTATTTACACAGTCTTTCCCAAGGTTCAAGCCATGGAAACAGCCACTAATATAATTATCAGGTTAGGCTGCGTACATCACGCCCTTTGGGTGTGGCCCTTCCTCGAATTCTATGTTAACGCGAAATGCTTGTACCACGGGCTGCCCTTTTTTTTATGA 1794 0.4415 MQIQMASVPFFSRFHLLPSNQSSFPHSTFHLHLHNPQHPFITNANPSSSDHKAQDFATNPVQGIGGSPKKKKAKEKVHWVCSNCGYSAGQWWGVCRSCGEAGTMKEFHETKGSDNKVSGFAVMDGAVGPWLPHQEETQLRPLRLAEVNRGLDQLHWRIPLNGPCGNEVSRVLGGGLVPGSLTLVGGDPGVGKSTLLLQIAAMITEECNDSEASPVVYVSGEESVEQIGNRADRLGITEDIYLYSSNDIEDILKKVQYLSPRALVIDSIQTVYLKGIMGSPGGIMQVKECTSTLLRFAKTTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSTHRMLRAVKNRFGSTDELGVFEMSHSGLQAVSNASEMFLSEQHLDSEILAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQVNGIHANRADMIISVLIKQAGLRLQENAVFLNVVSGLTLTETAGDLAIAAAICSSFLEVPIPNDIAFIGEIGLSGELRMVPRMEKRVYTVAKLGYRMCIVPKTAEKTLGNEGLEKMTLVGCRNLKEVIYTVFPKVQAMETATNIIIRLGCVHHALWVWPFLEFYVNAKCLYHGLPFFL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0322 597 PANTHER DNA REPAIR PROTEIN RADA 69 552 - -
Ahy9g0322 597 SMART AAA_5 178 336 IPR003593 -
Ahy9g0322 597 Pfam Rubredoxin metal binding domain 79 106 IPR041166 -
Ahy9g0322 597 Gene3D - 167 367 IPR027417 -
Ahy9g0322 597 PANTHER DNA REPAIR-LIKE PROTEINRADA 69 552 - -
Ahy9g0322 597 PRINTS DNA repair protein radA signature 81 105 - -
Ahy9g0322 597 PRINTS DNA repair protein radA signature 340 366 - -
Ahy9g0322 597 PRINTS DNA repair protein radA signature 415 438 - -
Ahy9g0322 597 PRINTS DNA repair protein radA signature 266 290 - -
Ahy9g0322 597 PRINTS DNA repair protein radA signature 170 198 - -
Ahy9g0322 597 PRINTS DNA repair protein radA signature 305 333 - -
Ahy9g0322 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 361 IPR027417 -
Ahy9g0322 597 Pfam Subunit ChlI of Mg-chelatase 432 522 - -
Ahy9g0322 597 ProSiteProfiles RecA family profile 1. 154 310 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Ahy9g0322 597 Pfam AAA domain 171 314 - -
Ahy9g0322 597 TIGRFAM sms: DNA repair protein RadA 73 534 IPR004504 GO:0003684|GO:0005524|GO:0006281
Ahy9g0322 597 SUPERFAMILY Ribosomal protein S5 domain 2-like 347 551 IPR020568 -
Ahy9g0322 597 Gene3D - 386 567 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0322 Ahy-Chr9 3667084 3672454 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0322 K04485 - gmx:100794165 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0198 18 1548494 1555844 Ahy9g0322 9 3667084 3672454 PCT
Ahy9g0322 9 3667084 3672454 Ahy18g0198 18 1548494 1555844 PCT