Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0317 ATGGGAAATTGCGATGAAGTGGGAGCATCGTCGAAGCAATACGGTGTGACGAAGCCAATTTCAAAGGCTGGCCCAACGGTTGCTGATATCCAAAGGACTAAGGAATTAGAGAAGTTTCTGGTTGATTCTGGGCTTTACGAGAGCGAGGAGGAAGCTGCCAAGAGAGTAGAGGTTCTTCACCGACTTGGACAGGTGTTAAAAAGTTGGGTGAAGATGCTTATCCGCAGAAGAGGATACACTGATCAAATGGTTGAGGATGCAAATGCTGTTATATTCACTTTTGGTTCTTATCGACTTGGTGTTCATGGTCCTGGGGCTGACTTGGATACTTTATGTATTGGGCCATCTTATGTTAATCGAGAGGAGGACTTTTTCTTTGTATTGCATGACATCCTTGCTAACATGGAGGAAATAACAGAACTGCAACCAATTCCAGATGCTCATGTCCCAGTAATGAAATTCAAGTTTGATGGAATATCGATTGATCTACTTTATGCAAGTATTTCTTGTTTAGTTGTGCGTGATGACTTGGACATAGCAGACGTTTCTATTCTACAAAACATTGATGAGCCAACAGTACGAAGTTTAAATGGCTGCAGGGTTGCAGATCAAATTCTTAAGCTTGTTCCAAATGTTCAGAATTTTCGAACAACACTTCGTTGCCTAAAGTTTTGGGCGAAAAGGAGAGGTGTCTATTCCAATGTTACTGGTTTTCTTGGCGGTGTTAACTTGGCCCTTCTTGTGGCTCGAGTGTGCCAATTATATCCAAATGCAATTCCAAGCATGCTTGTCTCTCGATTCTTTAGGGTGTATACACAGTGGCGGTGGCCAAATCCTGTCATGTTATGTCCTATAGAGGAGAATGAGTTGGGGTTTTCTGTTTGGGATCCTCGTAAAAATCCTCGTGATCGAACCCATCATATGCCAATCATTACTCCTGCTTATCCTTGTATGAATTCTAGTTATAATGTTTCTACAAGCACCCTTCGTGTTATGATGGAGCAGTTTCAATATAGCAACAAGATATGTGGGGAAGTTGAATTGAATAAGGCTCAATGGACTGCTCTATTTGAGCCCTATGCTTTCTTTGAAAGCTATAAAAACTACTTGCAAGTAGACATAGTTGCTGCTGATGTTGATGACTTGCGTGCTTGGAAAGGTTGGGTGGAATCACGCCTTCGACAACTAACTTTAATGATTGAGCGTGATACTTTTGGGAAGTTGCAATGTCATCCCTATCCTTATGAGTATATGGATATGTCAAGGCAGTGTGCACATTCTGCTTTCTTCATGGGATTGCAACGGAAGTCAGGGGAGATTGTTCAAGAAGGTCAGCAATTTGATATACGTGGGACTGTTGATGAGTTTCGACATTCAGTTAATATGTACATGTTCTGGAAGCCGGGGATGGACATTTATGTTTCTCATGTTCGTAGAAGGCAAATCCCATCCTACGTGTTTCCTGAGGGTTATAAACGATCTCGACAGTCAAGGCCAACTGGCCAACTGGACAATCCTCATAAATCATCTCATGAGGATATCTCTGGAACTGAACATTGTGAAAGAAACCCAAAAAGGAAGTATGTTGATAAGGTGGATGTGAAACGGGATATTGTAGTGAAAAAACAATTTAGTGTTCCAATGGATAGCTTCGCTAGAAGCAGGTTGAGCATGGGTTTTAGTGGTTTAACTGCTGATATGCACAATAGTGGCCATGATATGATTGAGAGGACAAAGTCTCCTGAATCTGACACTGAGTGTGCCTCAAATTCTAGTGTGGTTACCTCTCTTACAAGTGATGGTGGCTCCTGTGAAGATGTTGGGTCTACACAAATAGCAGTTTCAGTTGAAGATCACAAGGGTGTTGACGGGACGATCAGTGGCAGGTTTCATGATACGGCGTGTGGGATACATTCTGTCCCACTTGTGGAAAATGAAGTGGCTAGAGGAAATGAAGTATTACAAAATGAGCTACAACAACAGTTGGAGCCAAATCAAATGCCAGGGATGTTTCTTAATTCTAAAGGAAGCATCAACTCGGATGCTGTGCAAAAAGCAATCATAAGGAGATTGACACCTTGTGCAATGAAGTAA 2094 0.4193 MGNCDEVGASSKQYGVTKPISKAGPTVADIQRTKELEKFLVDSGLYESEEEAAKRVEVLHRLGQVLKSWVKMLIRRRGYTDQMVEDANAVIFTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFFVLHDILANMEEITELQPIPDAHVPVMKFKFDGISIDLLYASISCLVVRDDLDIADVSILQNIDEPTVRSLNGCRVADQILKLVPNVQNFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQYSNKICGEVELNKAQWTALFEPYAFFESYKNYLQVDIVAADVDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPYEYMDMSRQCAHSAFFMGLQRKSGEIVQEGQQFDIRGTVDEFRHSVNMYMFWKPGMDIYVSHVRRRQIPSYVFPEGYKRSRQSRPTGQLDNPHKSSHEDISGTEHCERNPKRKYVDKVDVKRDIVVKKQFSVPMDSFARSRLSMGFSGLTADMHNSGHDMIERTKSPESDTECASNSSVVTSLTSDGGSCEDVGSTQIAVSVEDHKGVDGTISGRFHDTACGIHSVPLVENEVARGNEVLQNELQQQLEPNQMPGMFLNSKGSINSDAVQKAIIRRLTPCAMK* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0317 697 CDD NT_PAP_TUTase 54 209 - -
Ahy9g0317 697 Gene3D - 15 357 - -
Ahy9g0317 697 SUPERFAMILY PAP/OAS1 substrate-binding domain 210 359 - -
Ahy9g0317 697 Pfam Nucleotidyltransferase domain 88 163 IPR002934 GO:0016779
Ahy9g0317 697 Gene3D Poly(A) polymerase predicted RNA binding domain 361 477 - -
Ahy9g0317 697 SUPERFAMILY Nucleotidyltransferase 12 208 IPR043519 -
Ahy9g0317 697 MobiDBLite consensus disorder prediction 490 524 - -
Ahy9g0317 697 PIRSF PolyA_polymerase 3 620 IPR014492 GO:0004652|GO:0005634|GO:0043631
Ahy9g0317 697 Gene3D Beta Polymerase, domain 2 47 203 IPR043519 -
Ahy9g0317 697 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 361 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Ahy9g0317 697 PANTHER NUCLEAR POLY(A) POLYMERASE 4 4 586 - -
Ahy9g0317 697 MobiDBLite consensus disorder prediction 505 524 - -
Ahy9g0317 697 Pfam Poly(A) polymerase central domain 15 359 IPR007012 GO:0004652|GO:0043631
Ahy9g0317 697 Pfam Poly(A) polymerase predicted RNA binding domain 362 421 IPR007010 GO:0003723|GO:0043631
Ahy9g0317 697 PANTHER POLY A POLYMERASE 4 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0317 Ahy-Chr9 3593846 3599193 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0317 K14376 - gmx:100783237 1026.93