Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0221 ATGGAAGTTAAAGAAGAAGAAGAAGTGAAGTTCTCAGCGTTCCCTTTCAAGCCATATTCGATTCAGATGGAATTCATGAAGGCTCTTTATCACTCTCTCAACCAAGGTGGCGTCTCCATGTTAGAAAGCCCTACTGGTACTGGGAAGACTATGAGTGTTATTTGTAGTGCTTTGCAATGGGTGCTTGATCAGAGGAGACAGCAGGAATCACAGGAAGCGTGTGGCAATGGTGATGGCGGAGTTGGTTCGGATGATGACCCTGATTGGTTGAGGAACTTTGTTGTTAACAAAGACCCCCAAGTTAAAGAGGATAAAGTGAAAAACAAGAAGGACAAGTTTCGGTATCTGTCAGGAAAAGCTGATAAGAAGGAGAAGGAGAATAAGGTAATTAGTAAAGATTTTGGGGATGTGCATTGTGAACATTCTCCTGCTGAAAAGATATGTCAAAGTTCACAAAAGAAAATTGATACAACAGATGTTGATGACAAGGAGTTTCTACTTGAAGAGTATGAGAGTGAAGAAGAAGGGGATTTAGGGAGTGTGATGTTGAAGAGGAAGGCTACTAAAAGCATGCTTAATTCTTCGAGTGAAGATGAGTCTGATGATGCTGAGGGGGAGGAGGATGAGAAGAAGTTCAAGGTATTCTGTAGCCGAACACATTCACAGCTTTCGCAGTTCATAAAGGAGTTACAGAAGACAATCTTTGCTAATGAGATGACTGTTGTGAGTTTAGGGTCAAGGAAAAATCTTTGCATTAACAAAGATGTGCTTTCACTTGGAAACTCCACACGCATAAATGAGCGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAAGCTACTAGAGTGAAGAACATAAGAGTAGGTGCACACACACGCAGAACAAAAGCCTCTTCTGGTTGCCCAATGCTTAGAAAACATAAACTACAACATGAATTCAGGAATGAGGTATCTGAACGAGGACCCTTGGATATTGAAGATCTTGCAAACCTTGGAAAAACATTGGGAACCTGTCCGTACTATGGCTCTAGAAGCATGGTTGTGAGAGCTGATCTTGTTGTTCTTCCATATCAATCTCTTTTGTCGAAATCATCTCGTGAAGCTCTTGGTCTGAATTTAAAATCCAATATTGTTATAATAGACGAGGCACATAATTTAGCTGATTCACTCATCAGCATGTATGACTCAAAAATTACTTTATCACAGCTGGAGAATGTGCATTGCCATGTAGAACGGTACTTTGTGAGATTCCGGAGTCTTTTGGGACCAGCCAACCGGAGATATATTCAAACTCTGATGGTTCTGACTCAAGCTTTCCTTCGAGTACTACTCAATGAGAAGAATGGAAATCCGATGGATTCTTACCATGACATAGAACATGCTTCTGAAGAAAGTAGAACATCTGATTTTACTATGGCCATCAATGATTTTATCTTTGAACTAAATATAGACAATATCAACTTGATCAAATTGTTAAAGTATATAAAGGAAAGTAATATCATGCACAAGGTTAATAGTTATGGAGAAAAGGTGGCTAATTCGGAGAACACATCAGCACGCAATGAAATTCGGGAACATGGGGAGGAGGGGGGATGTCTGTCTGCTTTCCAGGCATTAGCGGAGATATTACTGTCACTGACAAACAATGATAGCGATGGAAGGATAATAGTTTCGAGGTCTAGTTCATCATCAAGCTTTAGGAAACAAGGGGGATATATCAAGTTTGTTATGCTCAGTGGCGAGAAGATTTTCTCTGAGATTGTAGATCAAGCACATGCTGTTCTATTAGTAGGGGGAACTCTTCAACCTATAGAAGAGACAAGGGAGCGATTATTTCCGTGGTTACCACCGAATCAGTTGCATTTCTTTTCATGCGGCCACATTGTCCCTCCAGATAGCGTTATGCCAATTGCGGTTTCTCGTGGTCCTTCTGGCCGCTCCTTTGATTTTAGCTACAGCTCTAGAAGCTCACTAGACATGATGCGAGAACTAGGCCTTTTGCTATGTAACTTGGTGACTGTGGTTCCTGAAGGAATCGTAGTCTTCTTCCCTTCTTTCGATTATGAAGGTAAAGTGTATGAACTCTGGGGATCTTCTGGCATCATTGAGAGGATTACTAGGAGGAAGCGTATCTTTAGAGAGCCTAGGAATAATATGGAAGTTGAATCTGTTCTAAAGGAATATAAAGATGCCATTTGTGCATTATCAAGTGTGAGTACAGAAGCAAACCAAGCATCTCAAAGTGGTGCAGTGCTCCTTGCTGTTGTTGGTGGGAAGATATCTGAAGGGATCAACTTAAGTGATGGAATGGGTCGGTGTGTCATCATGGTTGGACTGCCATATGCTAGTCCATCTGATATCGAGTTATTGGAAAGGATAAAGCACATAGAAGGTTTTCGAAATTCGAAGTCCATTGAAAATACCCTATTTGGTGCAAGTTGTGATGTATATAGTGGAGATGCACAAGGTGGTTTTGACATCTTAAGAAGTTGCAGCCAGAGAGGGAAAGAGTACTATGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATTCGTCATATTAATGACTATGCAGCAATTTTGCTTGTTGATACTAGATATGCATCTGATTCCTCCAAAAGGAGCTTATCCCACCCAGTCAACAAGCTACCACAGTGGATAAAAGATCGTCTTGTTTCTTCCACTAATAACTATGGTGAAGTGCACAGGTTGCTCCATCAGTTTTTCAAATTTAAAAAGAGAAGCTGA 2760 0.4065 MEVKEEEEVKFSAFPFKPYSIQMEFMKALYHSLNQGGVSMLESPTGTGKTMSVICSALQWVLDQRRQQESQEACGNGDGGVGSDDDPDWLRNFVVNKDPQVKEDKVKNKKDKFRYLSGKADKKEKENKVISKDFGDVHCEHSPAEKICQSSQKKIDTTDVDDKEFLLEEYESEEEGDLGSVMLKRKATKSMLNSSSEDESDDAEGEEDEKKFKVFCSRTHSQLSQFIKELQKTIFANEMTVVSLGSRKNLCINKDVLSLGNSTRINERCLELQKKKKNEATRVKNIRVGAHTRRTKASSGCPMLRKHKLQHEFRNEVSERGPLDIEDLANLGKTLGTCPYYGSRSMVVRADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLISMYDSKITLSQLENVHCHVERYFVRFRSLLGPANRRYIQTLMVLTQAFLRVLLNEKNGNPMDSYHDIEHASEESRTSDFTMAINDFIFELNIDNINLIKLLKYIKESNIMHKVNSYGEKVANSENTSARNEIREHGEEGGCLSAFQALAEILLSLTNNDSDGRIIVSRSSSSSSFRKQGGYIKFVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVPPDSVMPIAVSRGPSGRSFDFSYSSRSSLDMMRELGLLLCNLVTVVPEGIVVFFPSFDYEGKVYELWGSSGIIERITRRKRIFREPRNNMEVESVLKEYKDAICALSSVSTEANQASQSGAVLLAVVGGKISEGINLSDGMGRCVIMVGLPYASPSDIELLERIKHIEGFRNSKSIENTLFGASCDVYSGDAQGGFDILRSCSQRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSLSHPVNKLPQWIKDRLVSSTNNYGEVHRLLHQFFKFKKRS* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0221 919 CDD SF2_C_XPD 632 871 - -
Ahy9g0221 919 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 8 442 IPR014013 GO:0005524
Ahy9g0221 919 SMART deadxpd 10 426 IPR006554 GO:0003678|GO:0016818
Ahy9g0221 919 Pfam Helicase C-terminal domain 668 884 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Ahy9g0221 919 SMART ultradead3 14 461 IPR014001 -
Ahy9g0221 919 Gene3D - 188 441 IPR027417 -
Ahy9g0221 919 SMART Cxpdneu3 686 873 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Ahy9g0221 919 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 11 905 IPR045028 -
Ahy9g0221 919 TIGRFAM rad3: DNA repair helicase (rad3) 152 902 IPR013020 GO:0003678
Ahy9g0221 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 396 IPR027417 -
Ahy9g0221 919 Gene3D - 646 887 IPR027417 -
Ahy9g0221 919 Pfam DEAD_2 215 403 IPR010614 GO:0003677|GO:0003678|GO:0005524
Ahy9g0221 919 Gene3D - 15 72 IPR027417 -
Ahy9g0221 919 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 11 905 IPR028331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0221 Ahy-Chr9 2552704 2557772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0221 K11273 - gmx:106794132 1286.17