Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0126 ATGCTTTGTTTCTCAACTTCACTGTCTTGTTCACATGCAAGTTTCACACTTTCACTTTCCTTGCTCATCAAGAGAATGCTTTCTAAGTCTTCTGATATTGCTTTTAAGTGTTCTGCACATTTTGATTCCAAATGTTTTGGAGAATATGCAATATCTTTGCTCGAAAGATGCAATTCCATGGAACAGTTAAAGCAAATTCATTCACAAACAATCAAAATGGGTCTAACTTCAGACCATTTATTTCAAAACAAAGTTATAGTCTTCTGTTGTACCAAGGATTGTGGAGATGTGAAATATGCTCATAAGGTGTTTGATACAATTCCAAAACCAAGTGGGTTCATTTGGAACACCATGATGAAGGGCTATTCTAGGAATAACTGTCCTGAAATTGGAGTTTCTATGTATATAGAAATGATCAGCAACGACACCAAGCCCGATCATTACACGCTTCCGTTCTTGTTGAAGGGATTCAACAGCAATGTGGCTTTGCGGTATGGGAAAATCTTGTTTAACAATGCAGTGAAACATGGATTTGATTCTAACGTGTTTGTTCAAAAGGCTTTCATTCATGTGTTTTCCTTGTGTGGTATGGTTGATATGGCACGGAAGGTCTTTGATATGGGTGAATCATGGGAAGTGGTTACCTGGAATGTAATGATATCCGGGTATAACAGAGTTAAGGCGTTTCAGAAATCAAAGAAGCTTTTTTCTGAGATGGAGAAGAAAGGAGTATCACCCAATTCAGTTACTATAGTTTTGATGCTTTCAGTATGCTCTAAATTGAAGGATTTACATGGGGGAAAGCACATATATAAGTATGTTGAAAAGGGTATTGTTGAACCTAATCTCATATTGGAAAATGCCTTAATTGATATGTTTGCAGTCTGTGGAGAAATGGGTGCTGCACAAAGTGTTTTCAACAAAATGAAGAGTAGAGATGTAATTTCTTGGACTTCCATCGTCTCAGGGTTCGCCAATGATGGCGAAATTAATTTAGCTAGGAAGTATTTTGATCAAATGCCTGAAAGAGATTATGTTTCCTGGACTGCCATGATTGATGGATACCTTAGACTTAATCATTTCAGGGAGGCTCTGGTGCTTTTCCGTGAGATGCAAATGTCAAATGTAAAACCTGATGAATTCACCATGGTCAGTATCCTATCGGCTTGCGCAAATCTGGGAGCACTCGAACTAGGGGAGTGGGTGAAGAATTACATTGACAAAAACAGTATCAAGAATGACACTTTTGTTGGGAATGCTCTGATAGACATGTACTTCAAATGTGGTAATGTTGAGAAAGCAAGGAAAATATTCAAGGAAATGCATCAGAAAGACAAGTTTACATGGACAGCAATGATAGTTGGTCTTGCCATTAATGGCCATGGTGAAGAAGCTCTTTCCATGTTTTCAAATATGATAGAAGCTTCAGTTACACCAGACGAGGTAACCTATATTGGTGTCCTGTGTGCATGTACACATGCCGGCATGGTAGAAAAGGGAAGAAACTTTTTCACTAGCATGACCGAGCGACACGGAATCAAGCCAAATATGACACATTATGGATGCATGGTTGATCTTCTTGGAAGAGCTGGCCAATTAAAAGAAGCTCTTGATGTCATTAAGACTATGCCCTTAAAGCCGAATTCAATTGTTTGGGGATCTCTTCTTGGTGCTTGTAGAGTTCACAGAAATGTGGAGCTGGCTGAAATGGCAGCAAAACAAATTCTTGAGTTAGAGCCTGAAAATGGAGCTGTTTATGTCCTGTTATGCAACATATACGCTGCGTGCAAGAGATGGGAGAGCTTGCGCCACGTCCGGGAAACCATGATGGAGAAAGGAATCAAGAAAACACCAGGTTGCAGCTTGATGGAAATGAATGGCAATGTATATGAATTTGTTGCTGGGGACCAATCACATCCTCAATCTAAAGAGATATATGCAAAGCTAGAAAACATGATGCAAGAGTTGAAGATTGCAGGGTATTCACCTGATACCTCAGAGGTTTTTCTTGATATTGGGGAAGAGGATAAGGAGAGTGCAGTTTATAGGCATAGTGAGAAGTTGGCTATTGCCTATGCAATTATTAGTTCAGGAAAAGAAGTTACCATAAGAATAGTAAAGAATCTTAGAATGTGTGTGGATTGTCACCATATGGCAAAGTTGGTATCTGAAGTTTATGGTAGGGAGATAATTGTTAGGGATAGGACTAGATTCCATCATTTCAGCCATGGTTCATGTTCATGTAATGATTTCTGGTAA 2259 0.3904 MLCFSTSLSCSHASFTLSLSLLIKRMLSKSSDIAFKCSAHFDSKCFGEYAISLLERCNSMEQLKQIHSQTIKMGLTSDHLFQNKVIVFCCTKDCGDVKYAHKVFDTIPKPSGFIWNTMMKGYSRNNCPEIGVSMYIEMISNDTKPDHYTLPFLLKGFNSNVALRYGKILFNNAVKHGFDSNVFVQKAFIHVFSLCGMVDMARKVFDMGESWEVVTWNVMISGYNRVKAFQKSKKLFSEMEKKGVSPNSVTIVLMLSVCSKLKDLHGGKHIYKYVEKGIVEPNLILENALIDMFAVCGEMGAAQSVFNKMKSRDVISWTSIVSGFANDGEINLARKYFDQMPERDYVSWTAMIDGYLRLNHFREALVLFREMQMSNVKPDEFTMVSILSACANLGALELGEWVKNYIDKNSIKNDTFVGNALIDMYFKCGNVEKARKIFKEMHQKDKFTWTAMIVGLAINGHGEEALSMFSNMIEASVTPDEVTYIGVLCACTHAGMVEKGRNFFTSMTERHGIKPNMTHYGCMVDLLGRAGQLKEALDVIKTMPLKPNSIVWGSLLGACRVHRNVELAEMAAKQILELEPENGAVYVLLCNIYAACKRWESLRHVRETMMEKGIKKTPGCSLMEMNGNVYEFVAGDQSHPQSKEIYAKLENMMQELKIAGYSPDTSEVFLDIGEEDKESAVYRHSEKLAIAYAIISSGKEVTIRIVKNLRMCVDCHHMAKLVSEVYGREIIVRDRTRFHHFSHGSCSCNDFW* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0126 752 TIGRFAM PPR: pentatricopeptide repeat domain 346 380 IPR002885 -
Ahy9g0126 752 TIGRFAM PPR: pentatricopeptide repeat domain 447 481 IPR002885 -
Ahy9g0126 752 TIGRFAM PPR: pentatricopeptide repeat domain 482 516 IPR002885 -
Ahy9g0126 752 TIGRFAM PPR: pentatricopeptide repeat domain 214 247 IPR002885 -
Ahy9g0126 752 TIGRFAM PPR: pentatricopeptide repeat domain 114 146 IPR002885 -
Ahy9g0126 752 TIGRFAM PPR: pentatricopeptide repeat domain 419 444 IPR002885 -
Ahy9g0126 752 TIGRFAM PPR: pentatricopeptide repeat domain 315 345 IPR002885 -
Ahy9g0126 752 Pfam PPR repeat 419 444 IPR002885 -
Ahy9g0126 752 Pfam PPR repeat 519 543 IPR002885 -
Ahy9g0126 752 Pfam PPR repeat 287 313 IPR002885 -
Ahy9g0126 752 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 445 479 IPR002885 -
Ahy9g0126 752 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 414 444 IPR002885 -
Ahy9g0126 752 SUPERFAMILY TPR-like 412 611 IPR011990 GO:0005515
Ahy9g0126 752 Pfam PPR repeat family 344 392 IPR002885 -
Ahy9g0126 752 Pfam PPR repeat family 213 259 IPR002885 -
Ahy9g0126 752 Pfam PPR repeat family 113 157 IPR002885 -
Ahy9g0126 752 Pfam PPR repeat family 445 491 IPR002885 -
Ahy9g0126 752 PANTHER - 219 329 - -
Ahy9g0126 752 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 480 515 IPR002885 -
Ahy9g0126 752 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 313 343 IPR002885 -
Ahy9g0126 752 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 219 329 - -
Ahy9g0126 752 PANTHER - 52 242 - -
Ahy9g0126 752 Gene3D Tetratricopeptide repeat domain 162 278 IPR011990 GO:0005515
Ahy9g0126 752 Gene3D Tetratricopeptide repeat domain 397 509 IPR011990 GO:0005515
Ahy9g0126 752 Gene3D Tetratricopeptide repeat domain 510 680 IPR011990 GO:0005515
Ahy9g0126 752 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 246 IPR002885 -
Ahy9g0126 752 Pfam E+ motif 629 656 IPR046849 -
Ahy9g0126 752 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 328 746 - -
Ahy9g0126 752 Pfam DYW family of nucleic acid deaminases 660 752 IPR032867 GO:0008270
Ahy9g0126 752 Pfam E motif 562 624 IPR046848 -
Ahy9g0126 752 Gene3D Tetratricopeptide repeat domain 43 161 IPR011990 GO:0005515
Ahy9g0126 752 Gene3D Tetratricopeptide repeat domain 287 396 IPR011990 GO:0005515
Ahy9g0126 752 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 344 378 IPR002885 -
Ahy9g0126 752 PANTHER - 328 746 - -
Ahy9g0126 752 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 111 145 IPR002885 -
Ahy9g0126 752 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 52 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0126 Ahy-Chr9 1184944 1187476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0126 48 752 Glycoside Hydrolase AT3G49170 34.631 1.12e-143 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0126 - - gmx:100801078 1221.45