Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0118 ATGTCAAGGAAGCCCGAGCGGGATTACGAAGATAGTCCATGTAGAGGACTTTCACGAAGATTTTGCAAAAGTGGGAGTTTGAAATGGTGGACATCCTCGTTCGCTTATCCATCAGTAGATTTCCATTTACGGAAAGGGGATTGTCCATCGCTGTTGGAGTTGTGCATCAAGAAAATAAATGAGGATATTGATAGATATAATACATTTTCTATGCTGCCTCGGGATATAAGTCAGCAAATTTTTAATAAATTGGTTTGTTCCCAACGCCTAACCAGCGTTTCCCTTGAAGCTTTTCGAGATTGTGCGCTTCAGGACCTTGACTTGGGAGAATATGCCGGTGTTAATGATTCTTGGATGGATGTCATCTCATCACAGGGTTCATCATTACTTTCCGTGGATCTTTCTGGGTCTGAGGTCACTGATTTTGGGCTGAGTTACCTAAAATATTGTGAAAATCTCCTTTCCTTAAATCTAAATTACTGTGATCAAATCTCGGATCATGGACTGGAGTGCATCAGTGGTCTGTCAAACTTGACAAGTTTGAGCCTCAGAAGAAATGATTCAATATCTGCTCAAGGAATGAGTATCTTGTCTGGTCTTGTTAATTTAGTCAAGTTGGACTTGGAGAGATGTCCTGGGATTCATGGAGGCCTGGTTCACATTCAAGGTTTAACCAAGTTGCAATCACTCAATATTAAATGGTGCAATTGCATAACCGATTCTGATATGAAGCCTCTATCAGAGTTGGTGTGTTTGGAGAGTCTTGAGATTTCTTGCAGTAAAGTCACTAATTTTGGCATCAGCTTTCTAAAAGGATTGCAAAAGCTTTCCTTACTAAACTTGGAAGGGTGCCTTGTAACAGCTGCATGCTTGGATTCTCTTGCAGATCTTCCTCTCTTGTCAAACTTGAATCTTAATAGATGCAATATTACCGATGACGGCTGTGAAAAGTTTTCACGGCTGGAAAATTTGAAAGTACTCAACTTGGGATTTAATGACATTACTGATGCATGTTTAGCACACTTGAAAGCAGTATTGACAAAGTTGGAGAGCTTGAACCTTGATTCATGTAGGATTGGTGATGAAGGGTTGATCAACTTGGCAGGCCATAGGCAACTGAAGTGCTTGGTATTGTCTGATACAGAAGTTGGAGATACTGGGTTACACCATTTGTCAGGATTGTCTGGCCTGGAGAAAATAAATCTGTCATTCACTGTGGTTAGTGATAGTGGTTTAAGGAAACTGTGTGGACTCACATCTCTTAAGTCACTTAATTTGGATGCTCACCAAATTACTGATGCTGGACTGGCAGCTCTTACAAGTTTGACTGGGCTTACTGACCTTGATTTATTTGGTGCACGAATCACAGATTATGGAACAAATTATTTGAGAAAATTTAAGAACCTGAGGTCCTTGGAGATATGTGGTGGAGGATTGACTGATGCCGGTGTGAAAAATATTAGAGCGCTTTCTTGTCTTATGTGCCTAAACTTATCACAAAACTGCAACCTTACGGACAAAAGCCTGGAATCAATTTCAGGGCTTACTCGATTAATCTCTTTGAATGTTTCAAATTCTCGCATCACCAACTCTGGTCTGCAGCATTTGAGAACACTGAAGAACTTGAGGTCTCTGACATTGGAATCCTGCAAGGTGACAGCATATGACATAAAGAAACTAAGATCAACACACCTCCCGAATCTGGTCAGCTTCCGGCCAGAATAG 1725 0.4081 MSRKPERDYEDSPCRGLSRRFCKSGSLKWWTSSFAYPSVDFHLRKGDCPSLLELCIKKINEDIDRYNTFSMLPRDISQQIFNKLVCSQRLTSVSLEAFRDCALQDLDLGEYAGVNDSWMDVISSQGSSLLSVDLSGSEVTDFGLSYLKYCENLLSLNLNYCDQISDHGLECISGLSNLTSLSLRRNDSISAQGMSILSGLVNLVKLDLERCPGIHGGLVHIQGLTKLQSLNIKWCNCITDSDMKPLSELVCLESLEISCSKVTNFGISFLKGLQKLSLLNLEGCLVTAACLDSLADLPLLSNLNLNRCNITDDGCEKFSRLENLKVLNLGFNDITDACLAHLKAVLTKLESLNLDSCRIGDEGLINLAGHRQLKCLVLSDTEVGDTGLHHLSGLSGLEKINLSFTVVSDSGLRKLCGLTSLKSLNLDAHQITDAGLAALTSLTGLTDLDLFGARITDYGTNYLRKFKNLRSLEICGGGLTDAGVKNIRALSCLMCLNLSQNCNLTDKSLESISGLTRLISLNVSNSRITNSGLQHLRTLKNLRSLTLESCKVTAYDIKKLRSTHLPNLVSFRPE* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0118 574 Gene3D Ribonuclease Inhibitor 296 376 IPR032675 -
Ahy9g0118 574 SMART LRR_CC_2 515 539 IPR006553 -
Ahy9g0118 574 SMART LRR_CC_2 297 321 IPR006553 -
Ahy9g0118 574 SMART LRR_CC_2 394 418 IPR006553 -
Ahy9g0118 574 SMART LRR_CC_2 176 200 IPR006553 -
Ahy9g0118 574 SMART LRR_CC_2 466 490 IPR006553 -
Ahy9g0118 574 SMART LRR_CC_2 419 442 IPR006553 -
Ahy9g0118 574 SMART LRR_CC_2 346 370 IPR006553 -
Ahy9g0118 574 SMART LRR_CC_2 150 175 IPR006553 -
Ahy9g0118 574 SMART LRR_CC_2 224 249 IPR006553 -
Ahy9g0118 574 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 4 531 - -
Ahy9g0118 574 Gene3D Ribonuclease Inhibitor 450 569 IPR032675 -
Ahy9g0118 574 Gene3D Ribonuclease Inhibitor 377 449 IPR032675 -
Ahy9g0118 574 Gene3D Ribonuclease Inhibitor 216 295 IPR032675 -
Ahy9g0118 574 Gene3D Ribonuclease Inhibitor 117 215 IPR032675 -
Ahy9g0118 574 SUPERFAMILY RNI-like 123 456 - -
Ahy9g0118 574 Pfam Leucine Rich repeat 150 173 IPR001611 GO:0005515
Ahy9g0118 574 Pfam Leucine Rich repeat 419 439 IPR001611 GO:0005515
Ahy9g0118 574 Pfam Leucine Rich repeat 176 195 IPR001611 GO:0005515
Ahy9g0118 574 Pfam Leucine Rich repeat 225 247 IPR001611 GO:0005515
Ahy9g0118 574 SUPERFAMILY Outer arm dynein light chain 1 417 554 - -
Ahy9g0118 574 Pfam Leucine rich repeat 468 528 IPR001611 GO:0005515
Ahy9g0118 574 Pfam Leucine rich repeat 299 359 IPR001611 GO:0005515
Ahy9g0118 574 ProSiteProfiles Leucine-rich repeat profile. 323 343 IPR001611 GO:0005515
Ahy9g0118 574 PANTHER UNCHARACTERIZED 4 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0118 Ahy-Chr9 1066967 1075410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0118 219 451 Receptor kinase-like Gene Family AT1G75820 26.068 3.26e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0118 - - gmx:100800666 889.797