Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0108 ATGCAAATTGTAAGCACCCTTAGAACCCTTCCCAAAACCCCTCGCTTTGATCACTTTGCTCCTTCCGCCATGGCCCTTCTTCTTCTTCTTCAACTCAGGACCAAACCCAACAACAACCCTTTCACAAACCCGACTTTGTTCTTTTTATTCTCCAAATATTTTTCTTCTTCTTCTTCTTCTTCTTCTCTCAGGGACCTTAAACACACTCTCAAACACCAACAACCACAATCACAATCACAATCACAATATCCTTCAACACCCTCAGAGCAATCCTCATTCACCAACACTCATTATCATCAGCAGCAACAGCAAAAGCAACATCAGCAGCAACAGAAGAACTCTCTCCACGATATCCGTCGAACCCTCTCCGAATTTCGCCGCCGCACCGCCGCCGAATCCCCGCCGGCCGAACCGCTTTCATTCAGTGATATCTACGACCGAACCATGTGCCGGAAAACGCCCTTTCCGGACGTGGAATCCTCCGGTACGGCGCACGGAGGAGGGAGGAGACCTTTCAACCTCGGCGCCGTTCGCGATGGCTTGCGGAAGCCAGGAGAGGCTCGCGCCAGAGACCGGAGGAGAGCTGATTCGATGTCGTTGGAGGCGTACAGGGAGGTGCTGAGATCGAGGCCGTTAGATTCCTCCGCCACCGCAGCAGCTGGAGCATCCTCGCCGGAGAATGTGGTTGGCACTGCGAGCTCGTTGCCGGATTCTGTGTTGAAGCAGAAGAGACGCAAAGAAGAGTCCGAGTTTATGAAGGTTTATAGCTTTGGCGAATTGGGGGAGAAATTGAAGAAGCTGAGACCTGAGGGAATGAGAAAAGAGTGGTTCTCTATTGAAGAATTGAACGAGAGGTTGAAGAGGATGAGAGAGAAGGAGGTGGAGGAAGCTGAGTCCAATGTCACAGGAGGGGTACTATTCAAGGACATGAGAGAGTGCCTGCTATCTGAAGATGAAAAGTCTAGGAAGAGTTCACTGCAGAAATCTGATATCTTAAGCCAGTTCATTGGGACTCCAGCCTACTATTCGGGTCTCCCTAAAGAGCAGCTTGTTGAAAAATACTTCCATCCAGATAATATGTCCTCAGAAGAAAAGTTGAAAATTGAACTTGCAAAGGTTAGAGATGAGTTCAAAATGTCAGAGTCAGACTGTGGATCTGCTCGAGTTCAAGTTGCACAACTCACAACTAAGATTAAGCATCTATCAGCTGTTCTACACAAGAAGGATGTGCATTCTCGTAAAGGCTTGATAGCAATGGTTCAGAGGAGAAAAAGATTATTGAAATACCTCAGAAGAAGTGATTGGGAATCTTATTGTTTCGTTATATCTAAGCTAGGTCTACGTGATAATCCAGATCATGGTCGCAAAACATAG 1374 0.4738 MQIVSTLRTLPKTPRFDHFAPSAMALLLLLQLRTKPNNNPFTNPTLFFLFSKYFSSSSSSSSLRDLKHTLKHQQPQSQSQSQYPSTPSEQSSFTNTHYHQQQQQKQHQQQQKNSLHDIRRTLSEFRRRTAAESPPAEPLSFSDIYDRTMCRKTPFPDVESSGTAHGGGRRPFNLGAVRDGLRKPGEARARDRRRADSMSLEAYREVLRSRPLDSSATAAAGASSPENVVGTASSLPDSVLKQKRRKEESEFMKVYSFGELGEKLKKLRPEGMRKEWFSIEELNERLKRMREKEVEEAESNVTGGVLFKDMRECLLSEDEKSRKSSLQKSDILSQFIGTPAYYSGLPKEQLVEKYFHPDNMSSEEKLKIELAKVRDEFKMSESDCGSARVQVAQLTTKIKHLSAVLHKKDVHSRKGLIAMVQRRKRLLKYLRRSDWESYCFVISKLGLRDNPDHGRKT* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0108 457 TIGRFAM S15_bact: ribosomal protein uS15 371 448 IPR005290 GO:0003735|GO:0005840|GO:0006412
Ahy9g0108 457 CDD Ribosomal_S15p_S13e 372 446 IPR000589 GO:0003735|GO:0005840|GO:0006412
Ahy9g0108 457 Gene3D - 365 413 - -
Ahy9g0108 457 SUPERFAMILY S15/NS1 RNA-binding domain 370 449 IPR009068 -
Ahy9g0108 457 Gene3D - 415 450 - -
Ahy9g0108 457 PANTHER S15/NS1, RNA-BINDING PROTEIN 34 456 - -
Ahy9g0108 457 Coils Coil 279 299 - -
Ahy9g0108 457 MobiDBLite consensus disorder prediction 72 111 - -
Ahy9g0108 457 MobiDBLite consensus disorder prediction 65 114 - -
Ahy9g0108 457 MobiDBLite consensus disorder prediction 216 238 - -
Ahy9g0108 457 MobiDBLite consensus disorder prediction 181 196 - -
Ahy9g0108 457 MobiDBLite consensus disorder prediction 155 196 - -
Ahy9g0108 457 Pfam Ribosomal protein S15 372 448 IPR000589 GO:0003735|GO:0005840|GO:0006412
Ahy9g0108 457 PANTHER S15/NS1, RNA-BINDING PROTEIN 34 456 - -
Ahy9g0108 457 SMART Ribosomal_S15_2 370 448 IPR000589 GO:0003735|GO:0005840|GO:0006412
Ahy9g0108 457 Hamap 30S ribosomal protein S15 [rpsO]. 360 449 IPR005290 GO:0003735|GO:0005840|GO:0006412
Ahy9g0108 457 MobiDBLite consensus disorder prediction 212 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0108 Ahy-Chr9 920211 923881 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0108 - - ahf:112709767 804.668