Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0103 ATGGCAGAGATCAAGAACAAGATCAAGATGAAGGCATCAGTGAGTTTTCCTGATGAATGCTGGGAATCAATCTTCAGATTCCTAGGCCACGGCCGAGACTTGGAATCGGTGTCCATGGTCTGCAAGCGGTTCCTCACAATTTCAAGCCAGCTTCAAGATTCCCTCACAATATTTGATGCAACAACAATGCTCATTCCAAAGCTGTTCTTGAGATTCTCAAGGCTCAAAGTCTTAGACCTCAGTTACTTCAATGGGAACCTCGAAGGCCTGCTTTGTCAGGTTTCACAATCCACCTTGGACCTTGATACCCTTAACCTTTCCAATCAGAGGACACTTCCCATTGATTTGTTCCGGGACATCGGCTCGAAGATGAAGAACTTAAGGGTGTTGATTTGTTCAAACATTGGCTCTCTTTGGGATAGCCATTTGATGATCATGGCCTATTGTTTCCCATTGCTTCAAGAGCTTGACATCAGCTTCCCATTGATTTCAGAAGCAACAGATTTTGGGATCTCAAAGTTGTCTTTGTTGCTCGAGCGCCTTCGCAAGATTAACTTCTCTGGAAACTACTTAGTCACTGATCAATCACTGGTAGCTCTGTGTCAGAACTGTATGACAATTGAAGACATTTCCTTCTTCAATTGTTTTAAGATAACTCAAGGAGGCATTGCTAATGCTATCAACTTCAGACCAACCTTGGTTTCCATAGCATTCAACATTAAGAAAAGAAGAATTCATGGACGTGGCTTGGCACCTATGCCAATTAACTTGGATTTGATTGATTCACTCAAGAGTTTGAAAAGCTTAACTTGTATTGATTTGTCGAATTCTTTTATCTCGGATGAGTTGCTCTGTTCTGTTGCAGAATGTTGTCATTCCATAAAGAAACTCATCCTCCAAGACTGCTGCAATTTCACATTTTCAGGAATATATTCTGTGGTATCAAATTGTCCATTAATACAATGCTTGGATCTTAGAAAAACCGACTTCCTAACCGATCATTGTATTGGCAAGCTATCAATGTTTCTTCTCAATTTAACCTCTATAAACCTCAGTGGTTGTGATCAGCTTACCAATTCAACATTTTACACACTGACAAGAGGTTGTCCTAAACTTGTTGAGATTAAAATGGACAGAACATATCTTGGAGAAGTAGGGGAAGATTCAGATTCTTCTCTTGTTCCGGTTCAGAACACTCAAGTGAAGAGTCTCTATCTGGGTCAAAATATTTTACTTGGTGATCAAAGTTTGATGAAAATGGCTTCTATTTGCCCCAATGTAGAGCTTCTCGACTTAAACTCTTGCGGCAGCATATCAGGAGAATGTGTCGTGGACGTTCTCAGGAAATGCCGAGAGATAAGGCACTTAGGCTTAGCCAATACAGGGGTGAAGCTGTTGAAGATGGACTTTAAAGTTTTGCAACTGAAGGTATTGAACTTGTCAGGATCAAGAATCAATGATGAAGCACTCTCCATAATCTCAAAATGTTGCTGTGGACTAGTAGTTCTGGATATTCAAGGTTGCAACAATGTTACCACAAAAGGGGTGAAGGAAGTGGTAGAAAGCTGCATGGAGTTGAGAGAGCTGAATTTGAAGAACTGTGATTTTGTAAATGATAATTTTGTTGCTTCCTTAGAACTTATAAGGCCATCATTGAGGAGAATAATCACAAACTCTTATGTTGGTGTTTGA 1692 0.4019 MAEIKNKIKMKASVSFPDECWESIFRFLGHGRDLESVSMVCKRFLTISSQLQDSLTIFDATTMLIPKLFLRFSRLKVLDLSYFNGNLEGLLCQVSQSTLDLDTLNLSNQRTLPIDLFRDIGSKMKNLRVLICSNIGSLWDSHLMIMAYCFPLLQELDISFPLISEATDFGISKLSLLLERLRKINFSGNYLVTDQSLVALCQNCMTIEDISFFNCFKITQGGIANAINFRPTLVSIAFNIKKRRIHGRGLAPMPINLDLIDSLKSLKSLTCIDLSNSFISDELLCSVAECCHSIKKLILQDCCNFTFSGIYSVVSNCPLIQCLDLRKTDFLTDHCIGKLSMFLLNLTSINLSGCDQLTNSTFYTLTRGCPKLVEIKMDRTYLGEVGEDSDSSLVPVQNTQVKSLYLGQNILLGDQSLMKMASICPNVELLDLNSCGSISGECVVDVLRKCREIRHLGLANTGVKLLKMDFKVLQLKVLNLSGSRINDEALSIISKCCCGLVVLDIQGCNNVTTKGVKEVVESCMELRELNLKNCDFVNDNFVASLELIRPSLRRIITNSYVGV* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0103 563 SUPERFAMILY F-box domain 15 49 IPR036047 GO:0005515
Ahy9g0103 563 PANTHER UNCHARACTERIZED 230 324 - -
Ahy9g0103 563 PANTHER UNCHARACTERIZED 325 549 - -
Ahy9g0103 563 Gene3D Ribonuclease Inhibitor 250 385 IPR032675 -
Ahy9g0103 563 Gene3D Ribonuclease Inhibitor 6 240 IPR032675 -
Ahy9g0103 563 SUPERFAMILY RNI-like 64 220 - -
Ahy9g0103 563 SUPERFAMILY RNI-like 258 546 - -
Ahy9g0103 563 PANTHER NODULIN-LIKE PROTEIN 325 549 - -
Ahy9g0103 563 PANTHER NODULIN-LIKE PROTEIN 10 236 - -
Ahy9g0103 563 SMART LRR_CC_2 291 316 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 266 290 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 398 423 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 343 368 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 497 522 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 523 548 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 178 203 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 424 449 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 317 339 IPR006553 -
Ahy9g0103 563 SMART LRR_CC_2 472 496 IPR006553 -
Ahy9g0103 563 PANTHER UNCHARACTERIZED 10 236 - -
Ahy9g0103 563 Gene3D Ribonuclease Inhibitor 386 465 IPR032675 -
Ahy9g0103 563 Gene3D Ribonuclease Inhibitor 466 560 IPR032675 -
Ahy9g0103 563 PANTHER NODULIN-LIKE PROTEIN 230 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0103 Ahy-Chr9 889534 891861 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0103 K10268 - gmx:100811565 702.975