Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2567 ATGAGCACGCCAACTGTTTGTGAAAATGCCAAAGAAGATATTTTTTTCCTTCATCAATTATGGCATGGGAATGAGGAATTGGAAGCCTTAAAGTTTGTAGCTTCCTCTTTGAAGAAGGGCATGCTTCAGCACGATTTCAAGAAATGGGGCTCCATGATCAGGACCTTATGTGTTGATTCCAGGCACAGGGAAGCCTTGTCCCTTTTCCATCAATGCATAAAGGGTTATGCAGATTTTAAACCCGATCACAGTGTTGTTGCTTCAATTCTCAAGTCTTGTTCTGCCCTATTGGCTCTCAAATTGGGCACAGCTCTTCATGGCTATGTTGTTAAGCAGGGCCATGATGCTTGCCAGGTCACTAACAAAGCATTGCTTAACATGTATGCAAAATGTGGCAGGCTTGTTGAATGTAATAAGATGTTTTATCAGCTCAGCCACCGTGATTCTGTCATTTGGAACATTGTTCTATCTGGGTTTTCAGGGTCCATGAAGTACGATTTGGATGTGATAAGGATGTTTCGGACAATGCACTCCAATGGGGCGGCTATGCCCAATTCGGTTACTGCTGCTATTCTTCTTCCTGTTTGTGCTCGTTTAGGGGATGTCGACGCTGGAAAGAGTGTGCAGGCTTATGTGATTAAGTCTGGTTTTGAGGCAGACACCCTTGCTGGGAATGCTCTTATATCAATGTATGCAAAGTGTGGGCTGGTATCTCATGATGCATATGCTGTTTTTGATGACATTGGTCACAAAGATGTTGTTTCATGGAATGCAATGATTGCAGGTCTTGCTGAGAATCTCTTGTTTGAAGACGCATTTACATTGTTCGGTTCAATGGTGAAAGGGCCTACACAACCAAATTATGCCACTATAGCAAATATTCTGCCTGTTTGTGCGTTGCTTGCTGAGAACGTTGCATACCAGTATGGAAGGCAAATCCACTCTTATGTGCTGCAACGGGCTGAACTGTCAGCTGATGTTTCTGTGTCCAATGCTTTGATTAGCTTCTACATAAGAATTGGTCGGATGATGGAAGCGGAATCTTTATTTTGGGCAATGGATGCAAGGGACTTGGTCTCTTGGAATGCTATTATTGCAGGATTCACATCAAATGGTGAATGGTTAAAAGCATTGCATCTATTGAGTAATTTAGTATCTCTAGAGATGCTATTGCCTGATTCTGTGACTATTGTTAGCATACTTCCACTTTGTGCTCAATTGAGAAACTTGCATGTAGGGAAACAGATCCATGCATATATCTTCAGACACCATTATCTTTTTGAAGATACTACTGTTGGGAATGCTTTAGTTAGTTTCTATGCAAAATGTGGCAATACAGAAAAAGCATATCATACTTTCAATATGATTCCTAGGAAAGATTTGATTTCATGGAATTCTATTCTTGACGCCTTTGGAGAGAAGAGGCATCATTCAAGATTTCTCAGCTTGTTACATTCAATGCTTAAACTAGGAATTAGACCTGACTCAGTCACAGTATTGGCCACAATCCATTTTTGTGCTTCTCTCTTGATAGTAGAAAAGGTTAAAGAAATACACAATTATTCTATTAAGGTTGGATCTCTATTTGGTGACACTGCTCCCACAATTGGAAATGCAATACTTGATGCATATGCTAAATGTGGTAACATGGACTATGCTAACAGAATGTTTCAGAAACTATCAGAAAAAAGGAATCTGGTCTCGTGCAATTCGATGATTTCAGGTTATGTGAGTTTAGGATCACATCATGATGCAAATATGATTTTTAGTGGGATGTCTGAGACAGATCTTACCACCTGGAATCTTATGATCCGGGTATATGCCGAAAATGATTGTCGGGATCAAGCTCTCAGACTGTTCTACGAGTTACAAGCTCAAAGGATGAAGCCAGATGAGGTGACTATCATGAGCATCCTTCCAGTATGCACACAAATGGCATCGGCACACTTGCTAACACAATGTCACGGCTATATCGTTCGTTCTTGTTTTGAGGATCTTCACCTAAAAGGAGCCCTCTTAGATGCATATGCAAAATGTGGTATCATAGGTTGTGCAAATAAGCTATTTCGCTCAAGTGCTGTTAAGGATTTGGTTATGTTTACTGCTATGATTGCTTGCAGTCATGCTGGCCATGTAGATGAAGGTCTGCAGATATTTTATTCGATGGAGAAAATCCATGGTATGAAACCAAATGCAGAACAGTATGCTTGTGTGGTGGATCTACTCGCTCGAGGTGGCCGAGTTAGGGAAGCATATTCTCTCATCACCAAGATGCCAATTGAAGCTAATGCCAGCCTTTGGGGGTCATTGCTTGGTGCCTGCAAAATCCATCATGAAGTCGAATTGGGGCGCATTGTAGCCAGCCATCTCTTCAAAATCAAAGCTGACGACATTGGAAACTATATTGTTTTATCGAATTTGTATGCAGCAGATGCTAGATGGGATGGGGTCATGGAGGTTAGAAAGATGATGAAGAACAAAGATTTGAAAAAGCCAGCAGGATGCAGTTGGATTGAAGTTGAGAAGAAACATAACATATTTGTGGCTGGGGATTGTTCCCACCCACAAAGAAGCATTATTTACAGTACTCTATGTACATTGGATCAACAAATTAAAGAACCAATAGAGTTTTTAGCGTAA 2640 0.4083 MSTPTVCENAKEDIFFLHQLWHGNEELEALKFVASSLKKGMLQHDFKKWGSMIRTLCVDSRHREALSLFHQCIKGYADFKPDHSVVASILKSCSALLALKLGTALHGYVVKQGHDACQVTNKALLNMYAKCGRLVECNKMFYQLSHRDSVIWNIVLSGFSGSMKYDLDVIRMFRTMHSNGAAMPNSVTAAILLPVCARLGDVDAGKSVQAYVIKSGFEADTLAGNALISMYAKCGLVSHDAYAVFDDIGHKDVVSWNAMIAGLAENLLFEDAFTLFGSMVKGPTQPNYATIANILPVCALLAENVAYQYGRQIHSYVLQRAELSADVSVSNALISFYIRIGRMMEAESLFWAMDARDLVSWNAIIAGFTSNGEWLKALHLLSNLVSLEMLLPDSVTIVSILPLCAQLRNLHVGKQIHAYIFRHHYLFEDTTVGNALVSFYAKCGNTEKAYHTFNMIPRKDLISWNSILDAFGEKRHHSRFLSLLHSMLKLGIRPDSVTVLATIHFCASLLIVEKVKEIHNYSIKVGSLFGDTAPTIGNAILDAYAKCGNMDYANRMFQKLSEKRNLVSCNSMISGYVSLGSHHDANMIFSGMSETDLTTWNLMIRVYAENDCRDQALRLFYELQAQRMKPDEVTIMSILPVCTQMASAHLLTQCHGYIVRSCFEDLHLKGALLDAYAKCGIIGCANKLFRSSAVKDLVMFTAMIACSHAGHVDEGLQIFYSMEKIHGMKPNAEQYACVVDLLARGGRVREAYSLITKMPIEANASLWGSLLGACKIHHEVELGRIVASHLFKIKADDIGNYIVLSNLYAADARWDGVMEVRKMMKNKDLKKPAGCSWIEVEKKHNIFVAGDCSHPQRSIIYSTLCTLDQQIKEPIEFLA* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2567 879 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 148 183 IPR002885 -
Ahy8g2567 879 TIGRFAM PPR: pentatricopeptide repeat domain 254 281 IPR002885 -
Ahy8g2567 879 TIGRFAM PPR: pentatricopeptide repeat domain 567 596 IPR002885 -
Ahy8g2567 879 TIGRFAM PPR: pentatricopeptide repeat domain 462 496 IPR002885 -
Ahy8g2567 879 TIGRFAM PPR: pentatricopeptide repeat domain 599 632 IPR002885 -
Ahy8g2567 879 Pfam E motif 777 839 IPR046848 -
Ahy8g2567 879 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 596 630 IPR002885 -
Ahy8g2567 879 PANTHER OS02G0290000 PROTEIN 512 705 - -
Ahy8g2567 879 PANTHER OS02G0290000 PROTEIN 412 509 - -
Ahy8g2567 879 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 357 391 IPR002885 -
Ahy8g2567 879 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 252 286 IPR002885 -
Ahy8g2567 879 Gene3D Tetratricopeptide repeat domain 425 526 IPR011990 GO:0005515
Ahy8g2567 879 Gene3D Tetratricopeptide repeat domain 208 301 IPR011990 GO:0005515
Ahy8g2567 879 Gene3D Tetratricopeptide repeat domain 302 420 IPR011990 GO:0005515
Ahy8g2567 879 Gene3D Tetratricopeptide repeat domain 527 655 IPR011990 GO:0005515
Ahy8g2567 879 Pfam PPR repeat 699 724 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 123 144 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 434 460 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 49 71 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 538 563 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 462 492 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 359 383 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 331 355 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 567 593 IPR002885 -
Ahy8g2567 879 Pfam PPR repeat 599 624 IPR002885 -
Ahy8g2567 879 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Ahy8g2567 879 Gene3D Tetratricopeptide repeat domain 658 859 IPR011990 GO:0005515
Ahy8g2567 879 Gene3D Tetratricopeptide repeat domain 47 207 IPR011990 GO:0005515
Ahy8g2567 879 PANTHER OS02G0290000 PROTEIN 133 411 - -
Ahy8g2567 879 PANTHER OS02G0290000 PROTEIN 39 133 - -
Ahy8g2567 879 PANTHER OS02G0290000 PROTEIN 705 874 - -
Ahy8g2567 879 PANTHER OS07G0578800 PROTEIN-RELATED 512 705 IPR045215 GO:0003723|GO:0009451
Ahy8g2567 879 PANTHER OS07G0578800 PROTEIN-RELATED 133 411 IPR045215 GO:0003723|GO:0009451
Ahy8g2567 879 PANTHER OS07G0578800 PROTEIN-RELATED 412 509 IPR045215 GO:0003723|GO:0009451
Ahy8g2567 879 PANTHER OS07G0578800 PROTEIN-RELATED 39 133 IPR045215 GO:0003723|GO:0009451
Ahy8g2567 879 PANTHER OS07G0578800 PROTEIN-RELATED 705 874 IPR045215 GO:0003723|GO:0009451
Ahy8g2567 879 Pfam PPR repeat family 251 291 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2567 Ahy-Chr8 48586843 48591810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2567 176 873 Glycoside Hydrolase AT3G49170 27.919 2.64e-84 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2567 - - adu:107463348 1659.81