LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy8g2557	ATGCAATCGTCCCGCAGCCACAATGAAAACGCCGCCGAACAGTCATCGGCGCCGTCGCGACCCCGCCTCACCTTCCGATCGCTCTCGGCGGTGGGATCTTCCTCTTCGTCGTCACCCTCACCGGCCTTAGGCCGCCACGTGAAGCGATCAATCTCCGCTTCCGCGAGATTTCCGCGCCAAAACAGTATGGCGCGCGAGGTGGTGCTAAACGACGTCGTTGGGAACGGGATTTCAGGAATACTGCACAAGTGGGTGAACTACGGGAGAGGGTGGCGGCCGCGGTGGTTCGAGCTACACGACGGCGTTTTGTCGTATTATAAGATTCATGGAAACGATAAGCTGGTGTTGAACGGTGAATTGGAGAATGATTCCAAGGTCATCGGAGTGGATTCCCTCCGCCGCATCAACACCCACCGACATTGCCCTTCGCGCCACCGTAAACCTGTCAGCGAAATGCATCTTATGGTGTGTTCGGTAAAAGAGAACAAGAATGACGAGAGGAGGTTCTCAATAAGCACCGGAACCAAGAAGAGGCTGCACCTTAGGGCTGAGAGCAGGGACGACCGGGAAGTTTGGGTGCAAGCCATTATGGCCGTTAAGGAAATGTACCCTCGTCTCTCCAACAAAGAGATCATGGCCCCTGTTGCCTCCGTCGCTGACTCTACTAGCAAGCTTCGCCAACGCCTTCTTCAGGAAGGCGTCAGCGAAGCTGCCATTCGAGACTGCGAGGATATTATGGGAGCAGAGGTCTTATACTTGCGGAAGCAAATTGTTGCTCTCAAACATAAGCAGTTGATGCTAATGGACACACTCCGCCATCTTGAGACAGAGAAGGTTGACCTGGAGAACACACTTGTTGACGACATAAAATCAAAGGATAATGATCCCTCCTATCATTCTTCTCATGAAAAATATAGTGATGGAAGTGTGAGTGATTCTTCAGATGAGCATGATAGACATGAAGATCAATTTGATGATGAACATAATGATGCATTCTTTGACACACAAGATTTTCTTTCTATAAGCCATGACTCTGAAGAAGAAGAACAGGATGAGGACTATGATGAAAATACTCCAAATGAAAGTGAAAAATCTTCAAGAAGACTTAGTTGTGTTGGATTGTTCAAGTATCCACAAGTGAAGAGGAGAACAAAGTTGCCAGAACCAGTTGAGAAGGAAAGTGGAGTGAGTCTATGGTCAATAATAAAAGAAAACATAGGAAAAGATCTTACAAAAGTGTGTCTTCCTGTTTACTTCAATGAACCACTCTCATCATTGCAAAAGTGTTGTGAAGATATGGAGTACTCTTACCTTCTAGACCGAGCATCTGAATGGGGTAAAATGGGTGATAGTTTGATGAGGGCACTACATGTAGCAGCATTTGCAGTTTCAGGGTATGCAAGCACCAGTGGTAGAAGTTGCAAACCTTTTAATCCATTGTTGGGTGAGACTTATGAGGCTGATTTTCCAGACAAAGGCTTTCGCTTTATCTCTGAGAAGGTCAGTCATCACCCCATGACTGTTGCATGCCATTGTGATGGCAATGGCTGGAAATTTTGGGGTGACAGCACCTTAAAAAGCAAATTCTGGGGAAGATCCATTCAGCTTGATCCTATTGGTATTTTGACTTTGGAATTTGATGATGGAGAAATCTTTCAATGGAGCAAGGTGACAACATCAATTTACAACCTTATTCTAGGAAAACTCTATTGTGATCATTATGGTACAATGAGGATAGAGGGAAACCGTGACTTTTCATGCAAGATTAAATTCAAAGAGCAATCAATCATTGATAAAAACCCTCACCAGGTGCAAGGCGTAATAGAAGATAAATATGGAGAAACAATGGCAAATATATTTGGAAAATGGGATGAGAGCTTGGTCTATGTTATTGGAGGGAATTCTAATAATAAGAAGAAAGGAGGGAAAGGCTCTAATTCTTCTAAACCCATTCTCATTTGGAAAACCAACCCACCACCTGAACACCAAACAAAATATAACCTTACACAATTTGCCATTACACTTAATGAAATCACACCTCGACTCCAGGAAAAGTTGCCACCAACAGATTCAAGACTAAGACCAGATCAAAGGTATTTAGAAAATGGAGAGCATGACATGGCCAATTCTGAGAAGTTGCGGCTGGAACAAAGACAGAGAGAGGCAAGGAAGTTGCAAGAGAGGGGTTGGAAACCAAAGTGGTTTGTTAAGGAAAATGGAAGTGAAAGTTATAGTTATAATGGTGGATATTGGGAAGCTAGGGAAATTGGAAATTGGGAATCTTGTCCTGACATTTTTGGCCAAATCTTAAATACTTCTGAGTCTAATTCCCCAACTACATGA	2343	0.4417	MQSSRSHNENAAEQSSAPSRPRLTFRSLSAVGSSSSSSPSPALGRHVKRSISASARFPRQNSMAREVVLNDVVGNGISGILHKWVNYGRGWRPRWFELHDGVLSYYKIHGNDKLVLNGELENDSKVIGVDSLRRINTHRHCPSRHRKPVSEMHLMVCSVKENKNDERRFSISTGTKKRLHLRAESRDDREVWVQAIMAVKEMYPRLSNKEIMAPVASVADSTSKLRQRLLQEGVSEAAIRDCEDIMGAEVLYLRKQIVALKHKQLMLMDTLRHLETEKVDLENTLVDDIKSKDNDPSYHSSHEKYSDGSVSDSSDEHDRHEDQFDDEHNDAFFDTQDFLSISHDSEEEEQDEDYDENTPNESEKSSRRLSCVGLFKYPQVKRRTKLPEPVEKESGVSLWSIIKENIGKDLTKVCLPVYFNEPLSSLQKCCEDMEYSYLLDRASEWGKMGDSLMRALHVAAFAVSGYASTSGRSCKPFNPLLGETYEADFPDKGFRFISEKVSHHPMTVACHCDGNGWKFWGDSTLKSKFWGRSIQLDPIGILTLEFDDGEIFQWSKVTTSIYNLILGKLYCDHYGTMRIEGNRDFSCKIKFKEQSIIDKNPHQVQGVIEDKYGETMANIFGKWDESLVYVIGGNSNNKKKGGKGSNSSKPILIWKTNPPPEHQTKYNLTQFAITLNEITPRLQEKLPPTDSRLRPDQRYLENGEHDMANSEKLRLEQRQREARKLQERGWKPKWFVKENGSESYSYNGGYWEAREIGNWESCPDIFGQILNTSESNSPTT*	781

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy8g2557	780	MobiDBLite	consensus disorder prediction	289	322	-	-
	Ahy8g2557	780	SUPERFAMILY	Oxysterol-binding protein-like	392	773	IPR037239	-
	Ahy8g2557	780	SMART	PH_update	75	203	IPR001849	-
	Ahy8g2557	780	MobiDBLite	consensus disorder prediction	1	47	-	-
	Ahy8g2557	780	MobiDBLite	consensus disorder prediction	344	367	-	-
	Ahy8g2557	780	MobiDBLite	consensus disorder prediction	1	43	-	-
	Ahy8g2557	780	Coils	Coil	708	728	-	-
	Ahy8g2557	780	MobiDBLite	consensus disorder prediction	687	710	-	-
	Ahy8g2557	780	Pfam	Oxysterol-binding protein	397	755	IPR000648	GO:0008289
	Ahy8g2557	780	Gene3D	-	75	203	IPR011993	-
	Ahy8g2557	780	MobiDBLite	consensus disorder prediction	683	710	-	-
	Ahy8g2557	780	MobiDBLite	consensus disorder prediction	344	358	-	-
	Ahy8g2557	780	Pfam	Pleckstrin homology domain	82	196	-	-
	Ahy8g2557	780	ProSiteProfiles	PH domain profile.	74	201	IPR001849	-
	Ahy8g2557	780	Gene3D	-	697	761	-	-
	Ahy8g2557	780	Gene3D	-	483	651	-	-
	Ahy8g2557	780	PANTHER	OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C	13	771	-	-
	Ahy8g2557	780	SUPERFAMILY	PH domain-like	77	207	-	-
	Ahy8g2557	780	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	13	771	IPR000648	GO:0008289

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy8g2557	Ahy-Chr8	48484818	48494188	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy8g2557	K20456		-	gmx:100781218	1073.92

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy18g2841	18	132816799	132826354	Ahy8g2557	8	48484818	48494188	hybridization