Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g2538 ATGCAAGAGGATCACAATAAGAAGATGAAAGTGAAGAAGGGTTGGCTTGCGGTTCAAGTTGGATTAGAAGATGAAAGTAGTGAAGAAGGTTCAACACCTCAAAGATTTGTCATACCTATTTCATACCTTTACCATCCACTATTTAAGAGACTTCTAGACAAAGCTTATGAGGTTTATGGCTATCATACCGATGGTCCACTCAAGCTACCGTGTTCCGTCGACGACTTCCTTCATCTACGGTGGCGAATCGAGAAAGAATCTAATCATCATGGTGCTGGCAGTCACCATAACCATCATAGCCACCATAATCATCGCCTTCCTCATGCTTTGTATAATTTTCACTCTTGTTAA 351 0.4103 MQEDHNKKMKVKKGWLAVQVGLEDESSEEGSTPQRFVIPISYLYHPLFKRLLDKAYEVYGYHTDGPLKLPCSVDDFLHLRWRIEKESNHHGAGSHHNHHSHHNHRLPHALYNFHSC* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g2538 116 Pfam Auxin responsive protein 7 82 IPR003676 GO:0009733
Ahy8g2538 116 PANTHER SMALL AUXIN-UP RNA-RELATED 9 94 - -
Ahy8g2538 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g2538 Ahy-Chr8 48232286 48232912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g2538 11 84 Calmodulin-binding Proteins AT3G43120 45.946 5.55e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g2538 K14488 - gmx:100809305 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2819 18 132475307 132475948 Ahy8g2538 8 48232286 48232912 hybridization