Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1516 ATGTACATGACGGCGTATTCCTCGTCTTCCTCTATGCTCCTCAGAGCAACAAGGACTAAGCTCATCTCTTCCTCTCTTTCTAGAACCTTCCTTTCTTCTCCTCCTCCTCGCCCTACCGCTTCTTATCGATCCCTTGCCTTCTCATCCTCCGCCGCCGCTGCCTTCCGTTCTTCCTCCGTCGCCGCCCGCTGGAGCCACTGGAGGTCTCCCCTCAGCCTCCGCTCTCAGATCAGAGCTGCCGCTCCCGTCCTCGAGCGGTTCCACCGCAAGCTAGCCACCGCGGCTGGTGAAAATCCTTTCAAGGGAAACCTTACCAGTCTTCCTAAGCCTGGAGGTGGCGAGTTCGGAAAGTACTACAGCCTTCCGTCTCTCAAGGACCCAAGGATTGATAGGCTACCATACTCTATCAGAATTCTGCTTGAATCTGCCCTCCGTAATTGTGACAATTTCCAAGTGACTAAAGAAGATGTAGAGAAGATTATTGACTGGGAAAACACTGCTGTAAAGCAAGTTGAAATTCCTTTCAAACCTGCTCGAGTCCTTCTGCAGGATTTTACTGGTGTCCCAGCTGTTGTTGATCTGGCTTGCATGCGTGATGCTATGAATAGACTTGGCAGTGATTCTAACAAGATCAATCCTCTGGTTCCTGTTGATCTTGTCATTGATCATTCAGTTCAGGTTGATGTAACAAGGTCAGAGAATGCTGTACAAGCCAATATGGAGCTCGAGTTCAAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGCTCAACTGCTTTCCGTAATATGCTTGTTGTTCCACCTGGTTCTGGTATAGTACATCAAGTCAATCTCGAATATCTTGGGCGAGTTGTTTTCAACAATGAGGGCCTACTCTATCCCGACAGTGTGGTTGGGACTGATTCCCATACAACTATGATAGATGGACTTGGAGTTGCTGGATGGGGTGTTGGTGGCATTGAAGCAGAGGCAGCTATGCTTGGACAGCCGATGAGCATGGTATTACCTGGAGTTGTTGGGTTCAAGTTATCTGGAAAATTGCGGAATGGTGTTACAGCTACTGATTTGGTTCTTACTGTGACACAAATGCTTAGGAAACATGGTGTTGTTGGAAAATTCGTTGAATTTTATGGTGATGGTATGGGTGAGTTATCATTGGCTGACAGGGCCACTATTGCCAACATGTCTCCTGAATATGGAGCAACCATGGGTTTCTTCCCCGTAGATCATGTTACATTACAATACCTCAAGTTAACTGGAAGAAGTGACGAGACTGTGGCAATGATAGAGGCTTATCTCAGGGCAAACAAAATGTTTGTTGACTATAATGAGCCTCAACAAGATAGAGCTTATTCATCCTATCTTGAATTGAACCTTGATGATGTTGAACCTTGTATTTCTGGGCCAAAGAGACCTCATGATCGAGTGCCTTTGAAAGAAATGAAGTCCGATTGGCGTGCATGTCTTGATAACAAAGTGGGCTTTAAGGGATTTGCAATACCAAAAGAAGCGCAAGGCAAAGTTGCGAAATTTAATTTCCATGGGCAGCCAGCTGAGCTGAAGCATGGCAGTGTTGTGATTGCTGCAATTACAAGCTGTACAAATACATCAAACCCAAGTGTTATGCTTGGGGCTGGTCTTGTAGCCAAAAAGGCCCACGATCTAGGTTTGCAGGTCAAGCCTTGGGTAAAAACGAGTCTTGCTCCTGGCTCTGGAGTTGTTACAAAATACCTACATCAGAGTGGTCTGCAAAAGTATCTAAATGAACAGGGTTTCAATATTGTTGGATTTGGCTGTACAACTTGTATTGGCAATTCAGGAGAGCTGGATGAATCAGTTGCTACTGCTATCTCAGAAAATGACGTTGTAGCTGCTGCTGTATTGTCTGGGAACCGTAACTTTGAAGGCCGTGTACATCCTTTGACAAGAGCTAACTACCTTGCCTCCCCTCCTCTAGTTGTTGCTTATGCCCTTGCTGGCACGGTTGACATTGACTTTGAAAAGGAGCCAATAGGGACAGGGAAGGATGGCAAGAATGTCTACCTTAGGGATATTTGGCCATCCACTGAAGAAATTGCACAGGCTGTTCAATCTAGTGTGTTGCCTGACATGTTCCGAAGTACATATGAATCTATTACCAAAGGTAACCCTATGTGGAACCAACTACAAGTTCCTGTTGACAAGTTGTATTCGTGGGATCCCAACTCAACATATATTCACGAACCTCCGTACTTCAAGGGTATGACCATGGATCCTCCTGGAGCTCATGGTGTTAAAGATGCCTATTGCCTACTGAATTTTGGTGACAGTATAACTACTGATCACATTTCTCCTGCTGGAAGTATTCACAAAGACAGTCCTGCTGCAAAGTACCTTATGGAGCGGGGAGTGGATCGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGCAATGATGAGGTGATGGCAAGGGGAACTTTTGCCAACATCCGCATTGTTAACAAGCTGTTAAATGGTGAAGTTGGCCCAAAGACAGTTCACATTCCTACAGGAGAGAAGCTTTATGTGTTTGATGCAGCAATGAGATACAAGAATGAAGGACATGACACCATTGTGCTGGCTGGAGCTGAATATGGTAGTGGAAGTTCAAGGGATTGGGCTGCCAAGGGTCCCATGCTATTGGGAGTCAAAGCCGTGATAGCCAAGAGTTTTGAGAGAATTCATCGCAGTAACTTGGTAGGAATGGGTATTATTCCCCTCTGCTTCAAAGCTGGTGAGGATGCCGAGACTTTGGGGTTGACTGGCCATGAACGGTACACCATTGACCTTCCAAATAAAATCAGTGACATAAGGCCTGGTCAAGATGTAACTGTCACAACCAACACTGGAAAGTCTTTCACCTGCACAGTTCGATTCGACACCGAGGTGGAACTGGCTTACTTTGACCACGGAGGCATCCTCCCATATGTCATCAGGAACCTCATTTCACAGTGA 2976 0.4587 MYMTAYSSSSSMLLRATRTKLISSSLSRTFLSSPPPRPTASYRSLAFSSSAAAAFRSSSVAARWSHWRSPLSLRSQIRAAAPVLERFHRKLATAAGENPFKGNLTSLPKPGGGEFGKYYSLPSLKDPRIDRLPYSIRILLESALRNCDNFQVTKEDVEKIIDWENTAVKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNRLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVQANMELEFKRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRANKMFVDYNEPQQDRAYSSYLELNLDDVEPCISGPKRPHDRVPLKEMKSDWRACLDNKVGFKGFAIPKEAQGKVAKFNFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHDLGLQVKPWVKTSLAPGSGVVTKYLHQSGLQKYLNEQGFNIVGFGCTTCIGNSGELDESVATAISENDVVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNVYLRDIWPSTEEIAQAVQSSVLPDMFRSTYESITKGNPMWNQLQVPVDKLYSWDPNSTYIHEPPYFKGMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKNEGHDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGHERYTIDLPNKISDIRPGQDVTVTTNTGKSFTCTVRFDTEVELAYFDHGGILPYVIRNLISQ* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1516 991 PANTHER ACONITATE HYDRATASE 52 991 - -
Ahy8g1516 991 SUPERFAMILY Aconitase iron-sulfur domain 112 726 IPR036008 -
Ahy8g1516 991 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 52 991 IPR006249 -
Ahy8g1516 991 Gene3D Aconitase, domain 3 97 465 IPR015931 -
Ahy8g1516 991 Gene3D Aconitase, domain 4 754 990 IPR015928 -
Ahy8g1516 991 ProSitePatterns Aconitase family signature 2. 592 605 IPR018136 -
Ahy8g1516 991 TIGRFAM aconitase_1: aconitate hydratase 1 116 989 IPR006249 -
Ahy8g1516 991 CDD AcnA_IRP 179 663 - -
Ahy8g1516 991 Gene3D - 690 751 - -
Ahy8g1516 991 Gene3D Aconitase, domain 3 466 689 IPR015931 -
Ahy8g1516 991 CDD AcnA_IRP_Swivel 767 937 IPR044137 -
Ahy8g1516 991 Pfam Aconitase C-terminal domain 790 918 IPR000573 -
Ahy8g1516 991 PRINTS Aconitase family signature 530 541 IPR001030 -
Ahy8g1516 991 PRINTS Aconitase family signature 240 253 IPR001030 -
Ahy8g1516 991 PRINTS Aconitase family signature 264 272 IPR001030 -
Ahy8g1516 991 PRINTS Aconitase family signature 465 479 IPR001030 -
Ahy8g1516 991 PRINTS Aconitase family signature 293 306 IPR001030 -
Ahy8g1516 991 PRINTS Aconitase family signature 592 605 IPR001030 -
Ahy8g1516 991 PRINTS Aconitase family signature 369 382 IPR001030 -
Ahy8g1516 991 PRINTS Aconitase family signature 307 322 IPR001030 -
Ahy8g1516 991 PRINTS Aconitase family signature 383 396 IPR001030 -
Ahy8g1516 991 SUPERFAMILY LeuD/IlvD-like 730 988 - -
Ahy8g1516 991 ProSitePatterns Aconitase family signature 1. 526 542 IPR018136 -
Ahy8g1516 991 Pfam Aconitase family (aconitate hydratase) 158 661 IPR001030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1516 Ahy-Chr8 31911902 31919472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1516 K01681 - gmx:100794803 1761.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0731 18 8011983 8019567 Ahy8g1516 8 31911902 31919472 hybridization
Ahy8g1516 8 31911902 31919472 Ahy13g1407 13 17728047 17737012 PCT