Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1490 ATGGATTTCACCCATCTGCTTCTTCTTCTCTTCTTCTTATTCTTTGGTGTGGGATTCTCGGAGAACACGAATCCGAGGTTGCTGGCGTCACCATCATTGTTATCAACGACTCAGATAAACTCGAACTCGATCCTTGTGGCTCTTCTGGACTCCCATTACACAGAGCTCGCGGAGCTCATAGAAAAAGCCATGCTCCTTCAAACACTCGAAGAAGCCGTAGCCACACACAACATCACAATCTTCGCACCCACCAACCAAGCCTTAGAATCAAACCTTGATTCTTTCTTCAAACGCTTCCTTCTCGAACCAGCTAATCTCCATTCCCTCCAAGCCCTCATTCTCTTGCACATCCTCCCAACCCGAATTTCATCCCAATATAGATTCGGGTCGACCCGATTCAACACGCTATCGTCCGAACCCATTCGCCTTCAGACGAATTCCACATCCAAAGAATGGACAGTCGATCGGGTCAAGATAACCCGTCCCGATGATGTTACCCGGCCCGATGGTATCATCCATGGGGTTAACGGCCTTCTCATTCCACGTTCCGTACAAGATGACTTCAACCGCCGCCGCAGTCTTCGCTCGATTGCCGCCGTGAAACCCGAGCCAGCTCCCGAAATCGATCCGAGAACCAACCGGGTTAAGAAGCTCGACCCGAAAGAAAAGCCTCCGGGCTCAAAACCCTCACTCCCGATCTATGAGGCGCTGGCACCGGGACCGTCACTAGCTCCGGCGTCGGCACCGGCACCTGGAGGCCACCACGGGCACTTCGACGGTGAGTCTCAGGTGAGGGACTTCATCCACACGCTAATCCACTACGGAGGGTACAACGAGATGGCGGACATTCTCGTAAACCTAACGTCACTGGCCACGGAGATGGGACGCTTGGTGTCAGAGGGTTACGTCCTCACCGTCCTTGCGCCGAACGACGAGGCTATGGCCAAGCTTACGACGGAGCAACTCAGTGAACCGGGGGCACCGGAGCAGATAATGTACTACCATCTGATACCGGAGTACCAAACAGAAGAGAGCATGTACAATGCTGTTAGAAGGTTCGGGAAGGTTAGGTACGATACGCTGCGGTTGCCGCATAAGGTGGTGGCGGTGGAGGCTGATGGTTCGGTGCGGTTCGGAAAAGGTGGCGGTTCGGCTTATTTGTTCGATCCTGATATATATACCGATGGAAGAATCTCTGTTCAGGGGATTGACGGGGTTTTGTTTCCGATGGAAGAAGGAGAGGAGACGGTGACGGGTCGGGTCAAGAACGGGAATCGGACGGGTCAACCCGTTAAGGTCGTTGTCAAGCATAGAAGAGGAAAATTGCTTGAAGCAGCATGCTGGATGCTTGGAACCGTCCGTCAACATTCTAGATTCACCTCTTGTCAATGA 1392 0.528 MDFTHLLLLLFFLFFGVGFSENTNPRLLASPSLLSTTQINSNSILVALLDSHYTELAELIEKAMLLQTLEEAVATHNITIFAPTNQALESNLDSFFKRFLLEPANLHSLQALILLHILPTRISSQYRFGSTRFNTLSSEPIRLQTNSTSKEWTVDRVKITRPDDVTRPDGIIHGVNGLLIPRSVQDDFNRRRSLRSIAAVKPEPAPEIDPRTNRVKKLDPKEKPPGSKPSLPIYEALAPGPSLAPASAPAPGGHHGHFDGESQVRDFIHTLIHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAVEADGSVRFGKGGGSAYLFDPDIYTDGRISVQGIDGVLFPMEEGEETVTGRVKNGNRTGQPVKVVVKHRRGKLLEAACWMLGTVRQHSRFTSCQ* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1490 463 Pfam Fasciclin domain 52 181 IPR000782 -
Ahy8g1490 463 Pfam Fasciclin domain 299 409 IPR000782 -
Ahy8g1490 463 Gene3D FAS1 domain 44 182 IPR036378 -
Ahy8g1490 463 Gene3D FAS1 domain 283 409 IPR036378 -
Ahy8g1490 463 ProSiteProfiles FAS1/BIgH3 domain profile. 264 392 IPR000782 -
Ahy8g1490 463 ProSiteProfiles FAS1/BIgH3 domain profile. 40 179 IPR000782 -
Ahy8g1490 463 SUPERFAMILY FAS1 domain 42 182 IPR036378 -
Ahy8g1490 463 SMART fasc_3 79 182 IPR000782 -
Ahy8g1490 463 SMART fasc_3 305 410 IPR000782 -
Ahy8g1490 463 MobiDBLite consensus disorder prediction 207 224 - -
Ahy8g1490 463 SUPERFAMILY FAS1 domain 243 410 IPR036378 -
Ahy8g1490 463 MobiDBLite consensus disorder prediction 199 255 - -
Ahy8g1490 463 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 30 463 IPR044654 -
Ahy8g1490 463 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 30 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1490 Ahy-Chr8 31359751 31362434 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1490 - - gmx:100782264 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0693 18 7267542 7270473 Ahy8g1490 8 31359751 31362434 hybridization
Ahy8g1490 8 31359751 31362434 Ahy13g1359 13 16826365 16829710 PCT
Ahy13g1359 13 16826365 16829710 Ahy8g1490 8 31359751 31362434 PCT