Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g1203 ATGTCTGTAAATCAATCTTTCCATTTTCAACTCTCCTCTTTTTCTGTTTCTATTTCTCACTCTTGCAATAATCTTCAGGTTTTGATGTTCGATTCTATTTACGGAAGAACATGCTTGCATTATTCAGCTTATTACGGCCATTCTTCTTGCCTTAAGGCAATTCTTTCTGCTGCTCAATCTAGTCCTGTCGCTGCTTCTTGGGGATTTTCTCGGTTTGTAAATATCAGAGATGGCAAAGGTGCAACGCCATTACACTTGGCAGCTCGCCAAAGAAGGCCGGACTGCGTGCGTGTTCTGTTAGACAGTGGAGCTCTTGTTTGTGCTTCAACAGGTGGATATGGATGTCCAGGGAGCACTCCCCTACATGTTGCGGCCAGAGGAGGATCTCTGGATTGCATTCGCGAGCTCTTAGCTTGGGGCGCCGATCGTCTACAGCGCGACGCATCCGGGAGAATACCGTATGTGGTTGCTATGAAGCACAAGCATGGGGCATGTGCATCACTGCTGAATCCCTCGTCTGCAGAGCCCCTTGTTTGGCCCTCTCCATTAAAGTTCATCAGCGAACTTAATCAAGAAGCCAAGGCCTTATTAGAGCAGGCCTTGAAGGATGCAAACAGAGAGAGGGAGAAAAATATATTATTGAAGCCTACCACCTACTCTCTCCCATCTCCATCCCATTCTGATGATGATAATATCTCTCAGGTTAGCGAATCAGCATTATGCTGCATTTGCTTTGAGCAAGAATGCACAATTGAAGTCCAGAACTGTGGGCACCAGATGTGTGCACAATGCACATTAGCCCTATGTTGCCACAACAAACCAAACCCTGCCACGGCTGCCCTTATGCCGCCGGTTTGTCCCTTCTGTCGAAGCGCCATAGCCAGGCTGGTGGCCGTGAAGGTGGAAGCTCAGGAGGAAGTGGATCAAGACACCAATAATGGTTCCAAGCTAAGCAAGTCATCAAGGAAAACAAGAAACACAAATGAGGGCGGCAGTAGCAGCTTCAAAGGCCTATCATTCGCCAAGTTGGGTAGCCGCAGCTCTGGAAGGATTGCTGCTGATGATGAATGGATTCACAAAGACTGA 1086 0.4779 MSVNQSFHFQLSSFSVSISHSCNNLQVLMFDSIYGRTCLHYSAYYGHSSCLKAILSAAQSSPVAASWGFSRFVNIRDGKGATPLHLAARQRRPDCVRVLLDSGALVCASTGGYGCPGSTPLHVAARGGSLDCIRELLAWGADRLQRDASGRIPYVVAMKHKHGACASLLNPSSAEPLVWPSPLKFISELNQEAKALLEQALKDANREREKNILLKPTTYSLPSPSHSDDDNISQVSESALCCICFEQECTIEVQNCGHQMCAQCTLALCCHNKPNPATAALMPPVCPFCRSAIARLVAVKVEAQEEVDQDTNNGSKLSKSSRKTRNTNEGGSSSFKGLSFAKLGSRSSGRIAADDEWIHKD* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g1203 361 ProSiteProfiles Ankyrin repeat region circular profile. 116 142 - -
Ahy8g1203 361 Pfam Ankyrin repeats (3 copies) 28 105 IPR002110 GO:0005515
Ahy8g1203 361 ProSiteProfiles Ankyrin repeat region circular profile. 79 104 - -
Ahy8g1203 361 SUPERFAMILY RING/U-box 240 295 - -
Ahy8g1203 361 PANTHER HOMEOBOX PROTEIN WARIAI 26 360 - -
Ahy8g1203 361 MobiDBLite consensus disorder prediction 310 341 - -
Ahy8g1203 361 Pfam Ankyrin repeats (many copies) 117 154 IPR002110 GO:0005515
Ahy8g1203 361 Coils Coil 183 210 - -
Ahy8g1203 361 PANTHER UBIQUITIN-PROTEIN LIGASE XBAT31, PUTATIVE-RELATED 26 360 - -
Ahy8g1203 361 ProSiteProfiles Zinc finger RING-type profile. 241 290 IPR001841 -
Ahy8g1203 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 311 IPR013083 -
Ahy8g1203 361 Gene3D - 15 175 IPR036770 -
Ahy8g1203 361 ProSiteProfiles Ankyrin repeat profile. 116 148 IPR002110 GO:0005515
Ahy8g1203 361 SMART ANK_2a 116 145 IPR002110 GO:0005515
Ahy8g1203 361 SMART ANK_2a 34 64 IPR002110 GO:0005515
Ahy8g1203 361 SMART ANK_2a 79 108 IPR002110 GO:0005515
Ahy8g1203 361 SUPERFAMILY Ankyrin repeat 33 171 IPR036770 -
Ahy8g1203 361 MobiDBLite consensus disorder prediction 305 361 - -
Ahy8g1203 361 ProSiteProfiles Ankyrin repeat profile. 79 111 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g1203 Ahy-Chr8 27400883 27402763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g1203 25 137 Miscellaneous Gene Families AT3G09550 33.088 8.09e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g1203 - - ahf:112706706 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0398 18 3397929 3400309 Ahy8g1203 8 27400883 27402763 hybridization
Ahy8g1203 8 27400883 27402763 Ahy13g0454 13 4662746 4665980 PCT
Ahy13g0454 13 4662746 4665980 Ahy8g1203 8 27400883 27402763 PCT