Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0838 ATGGATCTGGAGGATCAGGACCTTTTGTTGGAAGATGATGAGGTGGAACAAGACTACACCTACTTTCTTCGTCAATATTTGGAAGAGGAAGACCGCCTCGAAGATGACGATGGTGATGGTGTTGTTCACTTAGCTGAACCATCTTTGCACACATATCTCGGTGAAATTGAAGACACTCGCCACAGAACTGCTTTCTTGGATGGTGATTCTGTTGTCAACCTTCCCCTGTTTCGCCTTCAAGGAGTTGTACTCTTTCCCGGGGCTACTCTTCCCCTAAGAGTTATTGAACCTCATATGGTGGCTGCTGTTGAGAGAGCTTTAAGTCAGGTCGATGTTCCTTACACCATCGGCGTGATTCGAATTCACAGGGATACTGCAAATTGGAGGATGAAATCAGCTAGCATTGGGACAACTGCAGAGATTCGACAATATGGACGTCTACAGGATGGTTCGTTGAATGTGGTGACTCGCGGACAACAACGATTTCGCCTAAGAAGGTGTTGGAATGATGCAGATGGAGTGCCTTATGGAGAGATTGAAATTATTGAGGAAGGTCTACCATTGAAAACACCAAGGGATGTGTTTGGGGAATTAGGATCATCATCGGCCAGGAGCAGTGGTGATAAAGTCACAGGGAAGTCATATCAGGAAATTAGATCAAATCTAAATGAAGCTGAAGCAAAGGATTCAAGAATCGCTAGCTGTTCAACTTCCGGAAATCAGTCAGGCATAGGAGAAGAGCTTAATGACTCTTTTGAAAATAGATATGCCTACCCATCAAATAAAATATCAACGGCATTCTGGCCTCACTGGGTATATCGTATGTTTGACTCCCATTCGCTTGCACAAAGGGCTGCAGATATGTGGAGGAAGATAATTGGGGTGCCTAGCATGGATAATCTCGTTAAGAAGCCTGATATTTTATCATTTTATATTGCTAGTAAAATACCTGTGTCTGAATCTACAAGGCAGGAGCTTTTGGACATCAATGGCATTGCATATAGATTGCGCAAGGAAATTGAATTACTAGAGAGTATTGATATTATCCGATGTAAAAGCTGCCAGACTATAATTGCAAAACGAAGTGATATGTTGGTGATGTCAAGTGAGGGCCCTCTTGGTGCTTATGTGAACCCAGGTGGTTATGTACATGAAATAATGACTCTTCACAAGGCAAATGGCTTAGACCTCGTCGGGCCACCGGCTACAGAATATAGTTGGTTTCCTGGGTATGCATGGACGATCACTCGTTGTGCCTCATGCAGAACTCAAATGGGGTGGCTTTTTACAGCCACCACCAAGAAACTGAAACCTAGGTCGTTTTGGGGGATACGAAGTTGTCAAGTTGCATAA 1353 0.4375 MDLEDQDLLLEDDEVEQDYTYFLRQYLEEEDRLEDDDGDGVVHLAEPSLHTYLGEIEDTRHRTAFLDGDSVVNLPLFRLQGVVLFPGATLPLRVIEPHMVAAVERALSQVDVPYTIGVIRIHRDTANWRMKSASIGTTAEIRQYGRLQDGSLNVVTRGQQRFRLRRCWNDADGVPYGEIEIIEEGLPLKTPRDVFGELGSSSARSSGDKVTGKSYQEIRSNLNEAEAKDSRIASCSTSGNQSGIGEELNDSFENRYAYPSNKISTAFWPHWVYRMFDSHSLAQRAADMWRKIIGVPSMDNLVKKPDILSFYIASKIPVSESTRQELLDINGIAYRLRKEIELLESIDIIRCKSCQTIIAKRSDMLVMSSEGPLGAYVNPGGYVHEIMTLHKANGLDLVGPPATEYSWFPGYAWTITRCASCRTQMGWLFTATTKKLKPRSFWGIRSCQVA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0838 450 Gene3D Peptide methionine sulfoxide reductase. 342 450 - -
Ahy8g0838 450 Gene3D - 54 182 IPR046336 -
Ahy8g0838 450 Pfam ATP-dependent protease La (LON) substrate-binding domain 73 344 IPR003111 -
Ahy8g0838 450 ProSiteProfiles CULT domain profile. 346 450 IPR034750 -
Ahy8g0838 450 Gene3D - 277 341 - -
Ahy8g0838 450 PANTHER PROTEIN CEREBLON 44 448 - -
Ahy8g0838 450 ProSiteProfiles Lon N-terminal domain profile. 74 345 IPR003111 -
Ahy8g0838 450 SUPERFAMILY PUA domain-like 73 344 IPR015947 -
Ahy8g0838 450 SMART lon_5 73 345 IPR003111 -
Ahy8g0838 450 CDD CRBN_C_like 349 445 IPR034750 -
Ahy8g0838 450 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 348 439 IPR004910 -
Ahy8g0838 450 PANTHER CEREBLON 44 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0838 Ahy-Chr8 16572192 16575475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0838 K11793 - mnt:21389341 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3127 17 132996893 133000110 Ahy8g0838 8 16572192 16575475 hybridization