Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0507 ATGGCCACCACCGTGCCGGCGTTCTCATATGCGCCTTCCTTCGCTATCAAACCTCCACACACCGACGCCAATGCCTCCTCCTTTATTCCACCCTCTTCTCTTTCTCATCCTTCCTCCTTCTCTCCCCTCAGACGACGTCGTTTCACACGCGCCCCCGTTGTTGCCGCCCTTGCCCCTTCCAAGGGGACGCTAGGTAGTATTAGAAAGAGTCTCAACGATTTCATGAGCTTGAACTACTGGGTTGTTCGTGATTACTACCGCCTTGTTAGCTCTGTTAACTCCTTCGAGGCCCACATTCAGAAACTCTCCGACGAACAGTTAACGGCCAAGACGGAGGAGTTTCGCAGGAGGCTCGGACGTGGCGAGACCCTTGGAGATATTCAAGCTGAGGCGTTTGCTGTTGTTCGTGAAGCTGCATGGAGGAAGCTTGGGATGCGCCATTTTGATGTTCAGATTATTGGTGGGGCAGTGCTGCATGATGGGTCAATTGCCGAGATGAAAACAGGGGAGGGGAAAACATTGGTTTCCACGTTAGCAGCGTATCTTAATGCCCTCACTGGTGAGGGTGTTCATGTGGTAACCGTCAATGATTATTTAGCTCAGCATGATTCTGAATGGATGGGGAGTGTTCATCGCTTCTTAGGTCTTTCTGTAGGCCTTATTCAGAAGGGGATGAATGCTGCAGAGCGGAGATCCAACTATAGATGTGATATAACATATACCAATAACTCTGAACTTGGCTTTGATTATTTACGAGATAATCTTGCTGGAAATAGGGAAGACCTTGTGATGAGATGGCCAAAACCATTTCATTTTGCAATTGTTGATGAAGTGGATTCTGTCCTGATAGATGAAGGAAGAAATCCTTTGTTAATAAGCGGTGAGGCTAGTAAGGATGCTGCACGATATCCTGTTGCTGCAAAAGTAGCTGAACTGCTTGTGCAGGGCACTCATTATAACGTGGAGCTTAAAAATGAGTCAGTGGAGTTGACTGAGGAAGGAATTGCTCTTGCTGAAATGGCTCTTGAAACCAATGACCTTTGGGATGAAAATGATCCCTGGGCTAGGTTTGTGATGAACGCTTTAAAAGCTAAAGAGTTCTATCGACGAGATGTAGAGTACATAGTCCGAGATGGGAAGGCTTTAATTATCAATGAGCTGACAGGAAGAGTTGAAGAGAAACGGAGATGGTCTGAGGGGATTCACCAGGCTGTGGAGGCAAAGGAAGGTTTGAAGATTCAGGCAGATTCCGTTGTTGTGGCACAAATCACTTACCAGTCATTATTCAAGCTCTATCCAAAATTGTCAGGAATGACTGGGACTGCAAAAACAGAAGAGAGAGAATTCTTAAAAATGTTCCAGATGCCAGTCATTGAAGTGCCCACAAATCTTCCTAATATTCGTAAAGATCTTCCTATTCAAGCTTTCGCCACTGCTCGTGGGAAATGGGAGCAAGTTCGCCGAGAAGTTGAATATATGTTTAGACAAGGCCGTCCTATTTTAGTTGGGACAACTAGTGTAGAAAATTCTGAACTTTTGGCTGGTCTGCTTTGGGAGTGGAATATTCCCCACAATGTCCTGAATGCTCGACCTAAGTATGCTGCAAGAGAAGCTGAAATTGTTGCACAGGCAGGACGCAAACATGCCATTACCATCTCTACAAATATGGCAGGCAGGGGCACGGATATAATCCTTGGAGGAAATCCAAAAATGCTTGCCAGAGAAATTATAGAGGATAGCGTAATTCATTTATTGACACAACAGGTTCCAAATGTTGAACTTGCTAGTGAGACTGTTTCGCGACAGGTGCTTCCAAAGATAAAGGTTGGATCATCATCAATGGCCTTACTGGCTAAGGCAACCTTAATGGCCAAATATGTCTCGAAAAGTGAGGGTAGAAACTGGACATATCAGAAGGCTAAATCCTTGATCACAGAGGCTATTCAATTTAGTCTGTCATATAGTTTTGAGGAGCTGGAGGAGCTTGCTAATGAAGATTCTGAATTTTACCCTCTTGGTCCAACAGTAGCACTTGCCTATGTGTCAGTTCTGAAGGATTGTGAAGAGCACTGTTTGCATGAAGGCTCTGAAGTTAAAAGGCTTGGTGGCCTTCATGTAATTGGTACATCTTTACATGAGTCCCGGAGAATAGATAACCAGCTCCGTGGCAGAGCAGGAAGGCAGGGAGATCCAGGTTCAACGCGATTTATGGTTAGCTTGCAGGACGAGATGTTTCAAAAGTTCAATTTTGATACGGAATGGGCTGTCAGACTTATATCAAAGATTACAAATGATGAGGATATGCCAATTGAGGGTGATGCCATTGTGAAGCAGCTCTTGGGGTTGCAAATCAATGCAGAGAAGTTCTTCTTCAGCATAAGAAAGAGCCTAGTTGAATTTGATGAAGTATTGGAGGTGCAGCGAAAGCATGTTTATGATCTAAGGCAGTTGATCTTGACTGGAGATGATGAAAGCTGTTCCCAACACATATTCCAGTACATGCAAGCAGTTGTGGATGAGATTGTCTTCAGTAACATCAATCCAATGAAGCATCCATGTACCTGGAGTTTGAGTAAGCTCTTGAAAGAGTATATGACAATTGGTGGAAAGCTGCTTCATGAATCTTTTGGAGGGATCACCGATGACTCTTTGTTAACCTCACTTGAGCAACTGAATGATGCGGGTTCCATTGATATTGTCAACTTTTCCCTTCCAAATCTGCCCACACCTCCAAATGCGTTCAGGGGAATCCGCAGGAAAAGCTCTTCATTAAGACGTTGGCTTGTTATTTGCTCTGATGATCTAATCGAGAACGGGAAGTATCGGACAACATCTAATCTCCTCCGCAAATATCTTGGAGATTTTCTAATTGCTTCATATCTAAATGTTGTTGAAGAGTCTGGTTATGAAGATAAATATGTCAAGGAAATTGAGAGAGCTGTTCTTTTGAAAACTCTTGATTGCTTCTGGAGAGATCACCTTGTAAACATGAATCGGCTCAGTTCTGCAGTGAATATAAGGAGCTTTGGGCACAGAAACCCTCTTGAAGAGTACAAAATTGACGGTTGCCGTTTTTTCATCTCAATGCTTAGTGCAACAAGGAGGTTAACTGTAGAAGCGCTGTTACAGCATTGGTCATCTCCAATGGAATCACTTGAACTATCTTGA 3168 0.4397 MATTVPAFSYAPSFAIKPPHTDANASSFIPPSSLSHPSSFSPLRRRRFTRAPVVAALAPSKGTLGSIRKSLNDFMSLNYWVVRDYYRLVSSVNSFEAHIQKLSDEQLTAKTEEFRRRLGRGETLGDIQAEAFAVVREAAWRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQHDSEWMGSVHRFLGLSVGLIQKGMNAAERRSNYRCDITYTNNSELGFDYLRDNLAGNREDLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAARYPVAAKVAELLVQGTHYNVELKNESVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVEYIVRDGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEREFLKMFQMPVIEVPTNLPNIRKDLPIQAFATARGKWEQVRREVEYMFRQGRPILVGTTSVENSELLAGLLWEWNIPHNVLNARPKYAAREAEIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLAREIIEDSVIHLLTQQVPNVELASETVSRQVLPKIKVGSSSMALLAKATLMAKYVSKSEGRNWTYQKAKSLITEAIQFSLSYSFEELEELANEDSEFYPLGPTVALAYVSVLKDCEEHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNFDTEWAVRLISKITNDEDMPIEGDAIVKQLLGLQINAEKFFFSIRKSLVEFDEVLEVQRKHVYDLRQLILTGDDESCSQHIFQYMQAVVDEIVFSNINPMKHPCTWSLSKLLKEYMTIGGKLLHESFGGITDDSLLTSLEQLNDAGSIDIVNFSLPNLPTPPNAFRGIRRKSSSLRRWLVICSDDLIENGKYRTTSNLLRKYLGDFLIASYLNVVEESGYEDKYVKEIERAVLLKTLDCFWRDHLVNMNRLSSAVNIRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEALLQHWSSPMESLELS* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0507 1055 CDD DEXDc_SecA 106 462 - -
Ahy8g0507 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 752 IPR027417 -
Ahy8g0507 1055 Gene3D Helical scaffold and wing domains of SecA 774 886 - -
Ahy8g0507 1055 Gene3D - 296 416 - -
Ahy8g0507 1055 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 66 1053 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 SUPERFAMILY Pre-protein crosslinking domain of SecA 294 415 IPR036670 GO:0016020|GO:0017038
Ahy8g0507 1055 SUPERFAMILY Helical scaffold and wing domains of SecA 775 873 IPR036266 -
Ahy8g0507 1055 ProSitePatterns SecA family signature. 550 565 IPR020937 GO:0006605|GO:0006886|GO:0016020
Ahy8g0507 1055 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 153 316 IPR014001 -
Ahy8g0507 1055 PRINTS SecA protein signature 424 441 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 PRINTS SecA protein signature 181 191 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 PRINTS SecA protein signature 234 254 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 PRINTS SecA protein signature 461 474 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 PRINTS SecA protein signature 127 151 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 PRINTS SecA protein signature 165 179 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 PRINTS SecA protein signature 387 409 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 SMART SecA_DEAD_2 71 450 IPR011115 GO:0005524|GO:0016020|GO:0017038
Ahy8g0507 1055 Gene3D - 465 771 IPR027417 -
Ahy8g0507 1055 SMART SecA_PP_bind_2 295 406 IPR011130 GO:0016020|GO:0017038
Ahy8g0507 1055 Pfam SecA preprotein cross-linking domain 302 406 IPR011130 GO:0016020|GO:0017038
Ahy8g0507 1055 PANTHER PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC 66 1053 - -
Ahy8g0507 1055 SUPERFAMILY Helical scaffold and wing domains of SecA 942 1052 IPR036266 -
Ahy8g0507 1055 Hamap Protein translocase subunit SecA [secA]. 66 1047 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 Gene3D - 86 463 IPR027417 -
Ahy8g0507 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 463 IPR027417 -
Ahy8g0507 1055 ProSiteProfiles SecA family profile. 67 771 IPR014018 -
Ahy8g0507 1055 TIGRFAM secA: preprotein translocase, SecA subunit 92 863 IPR000185 GO:0005524|GO:0006605|GO:0006886
Ahy8g0507 1055 Pfam SecA Wing and Scaffold domain 769 1043 IPR011116 GO:0016020|GO:0017038
Ahy8g0507 1055 CDD SF2_C_secA 468 739 IPR044722 -
Ahy8g0507 1055 Pfam SecA DEAD-like domain 82 449 IPR011115 GO:0005524|GO:0016020|GO:0017038
Ahy8g0507 1055 Gene3D Helical scaffold and wing domains of SecA 911 1046 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0507 Ahy-Chr8 10119533 10129258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0507 K03070 - gmx:100793437 1754.18