Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0451 ATGCAAAGGTTTAGCCTTTGCACAAGTACTAACAATACATTAACGTACTCATCGCTCTTGTTTTCTTCCATAAGGAACCACATTAGTCAAGGTTCTCATAAATGTGCTCTTCTTCTGTATAAACAAACTCGCCGCGAAGGTCTCTATGATCCCAGCGTTGTCCCTTTGTTGTTCAAGGCTTGTGTTTCTCTCTCAATTCTTCACCACGTTAAGGCCTTGCATGCCGAGTCCATTAAAGCTGGTTCACATTGTGATGTGTTCATCGGAACAGCATTAGTAGGAACTTATTCAAAATGTGGTATCCTTGGGGACTCCCGCAAGGTGTTTGATACAATGCCTGACAGAAATGTTGTAACTTGGAATGCAATGATTGGTGGGTACTTGAGAGCTGGGGACAAAGAATCTGCCTCCTCAATGTTTGAGGCGATGCCGGAGAAGACTCCCGTGTCTTGGAGCCAGATGATTGATGGGTTTGCAAGGAACGGGGATACTGCTGCTGCTAGGAGGTTGTTCAATAAGGTTCCGGACGAGGCAAAGAACGTAGTGACGTGGACTGTGATGGTTGATGGGTATGCTAGGAATGGGGATATGGAAGCTGCCAGGGAGATCTTTGAACAGATGCCAATTAGGAACTGCTTTGTGTGGTCATCTATGATTTGTGGTTATTGCAAGAAGGGCATTGTCGAGGAGGCTGGGGTGATTTTCGAGCGCGTTCCAGAACGCAACGTGGAGATTTGGAATTCAATGATTGCTGGGCATGTCCAGAATGGATTTGGTGAAAAAGCACTGCAGCTTTTTGAGGAAATGAAGGGTGAAGGGTTTGAACCGGATGAATTCACTGTTGTTAGTGTTTTATCTGCATGTTCTCAGCTGGGACTCTTGGATGCCGGTAAGGAAATCCATAACATGATAAAGCAGAAAGGGATGAGGTTGAGTCCCTTTGTTGTGAGTGGATTGGTTGACATGTATGCAAAATGTGGGGACCTGGCCAATGCAAGGTTGGTATTTGAAGCATCAGAGTCCATTAAGAAGAACATCATCTGCTGGAACGCAATGATTTCAGGCTTTGCCATCAATGGAAAATTCCATGAAGTCCTTGAGTGTTTTGGCAGATTGGAGGAATCAAATATAAAGCCTGATTCAATCACCTGTCTCATTGTGCTCTCTGCTTGTGCTCATGGTGGTTTGGTAAATGAGGCTTTGGAAGTAGCAGCTAAAATGGAAAGATATGGAATTGAAATAGGAATTAGACATTATGGATGCATGGTTGACCTATTGGGAAGAGCAGGGAGGTTAAAGAAGGCTTATGACTTGATAAAGAGAATGCCAATGAAACCGAATGAAGCTGTTTTTGGGGCACTGCTTGGTGCATGCCGGATTCATTCAGACGTGCAAATGGCAGAACAAGTAATGAAATTAATCAGTGCAAGCACTGTTTCAAGTTCTGATTCTCTCAATGTGCTTCTGTTCAATACCTATGCAGCTTCTGAAAAATGGGAGAAATGTGAACAGATGAGGATCAGAGTAGATGAAAGAATTCAAAAGACACCTGGGTGCAGTTCATTCATCTTCAGTGCTTCGTCCATGTTCACTTGGACAAAGTAA 1605 0.4374 MQRFSLCTSTNNTLTYSSLLFSSIRNHISQGSHKCALLLYKQTRREGLYDPSVVPLLFKACVSLSILHHVKALHAESIKAGSHCDVFIGTALVGTYSKCGILGDSRKVFDTMPDRNVVTWNAMIGGYLRAGDKESASSMFEAMPEKTPVSWSQMIDGFARNGDTAAARRLFNKVPDEAKNVVTWTVMVDGYARNGDMEAAREIFEQMPIRNCFVWSSMICGYCKKGIVEEAGVIFERVPERNVEIWNSMIAGHVQNGFGEKALQLFEEMKGEGFEPDEFTVVSVLSACSQLGLLDAGKEIHNMIKQKGMRLSPFVVSGLVDMYAKCGDLANARLVFEASESIKKNIICWNAMISGFAINGKFHEVLECFGRLEESNIKPDSITCLIVLSACAHGGLVNEALEVAAKMERYGIEIGIRHYGCMVDLLGRAGRLKKAYDLIKRMPMKPNEAVFGALLGACRIHSDVQMAEQVMKLISASTVSSSDSLNVLLFNTYAASEKWEKCEQMRIRVDERIQKTPGCSSFIFSASSMFTWTK* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0451 534 Pfam PPR repeat 418 443 IPR002885 -
Ahy8g0451 534 Pfam PPR repeat 149 173 IPR002885 -
Ahy8g0451 534 Pfam PPR repeat 118 146 IPR002885 -
Ahy8g0451 534 Pfam PPR repeat 182 212 IPR002885 -
Ahy8g0451 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 380 414 IPR002885 -
Ahy8g0451 534 Gene3D Tetratricopeptide repeat domain 147 210 IPR011990 GO:0005515
Ahy8g0451 534 Gene3D Tetratricopeptide repeat domain 211 316 IPR011990 GO:0005515
Ahy8g0451 534 Gene3D Tetratricopeptide repeat domain 5 146 IPR011990 GO:0005515
Ahy8g0451 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 116 146 IPR002885 -
Ahy8g0451 534 PANTHER BNACNNG13520D PROTEIN 20 521 - -
Ahy8g0451 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 242 276 IPR002885 -
Ahy8g0451 534 SUPERFAMILY TPR-like 106 269 IPR011990 GO:0005515
Ahy8g0451 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 147 177 IPR002885 -
Ahy8g0451 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Ahy8g0451 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 345 379 IPR002885 -
Ahy8g0451 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 277 311 IPR002885 -
Ahy8g0451 534 PANTHER OS01G0913400 PROTEIN-RELATED 20 521 - -
Ahy8g0451 534 Gene3D Tetratricopeptide repeat domain 317 528 IPR011990 GO:0005515
Ahy8g0451 534 Pfam PPR repeat family 242 288 IPR002885 -
Ahy8g0451 534 Pfam PPR repeat family 344 392 IPR002885 -
Ahy8g0451 534 TIGRFAM PPR: pentatricopeptide repeat domain 245 278 IPR002885 -
Ahy8g0451 534 TIGRFAM PPR: pentatricopeptide repeat domain 149 173 IPR002885 -
Ahy8g0451 534 TIGRFAM PPR: pentatricopeptide repeat domain 347 381 IPR002885 -
Ahy8g0451 534 TIGRFAM PPR: pentatricopeptide repeat domain 214 244 IPR002885 -
Ahy8g0451 534 TIGRFAM PPR: pentatricopeptide repeat domain 118 145 IPR002885 -
Ahy8g0451 534 TIGRFAM PPR: pentatricopeptide repeat domain 182 212 IPR002885 -
Ahy8g0451 534 TIGRFAM PPR: pentatricopeptide repeat domain 382 414 IPR002885 -
Ahy8g0451 534 TIGRFAM PPR: pentatricopeptide repeat domain 419 442 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0451 Ahy-Chr8 9038501 9040301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0451 50 520 Glycoside Hydrolase AT3G49170 30.992 1.54e-61 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0451 - - gmx:100802813 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2700 17 124568297 124570478 Ahy8g0451 8 9038501 9040301 hybridization