Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0440 ATGGTGCTCACGTCCTCTGCACGTGACTACGTCAACCGCATGCTGCAGGACATCTCCGGCATGAAGGTCCTAATCCTCGATTGCCAAACGGTGAGTATTGTGAGCGTTGTGTATTCACAGTCAGAGCTTCTTCAGAAGGAAGTATTCTTGGTGGAGTTGGTGGATTCCATAACCAAGTCGAAGGAGCTTATGTCGCATCTCAAGGCCGTTTACTTCCTTCGCCCTACGACGGAGAACATCCAGCATTTGCGCCGCCAGCTGGCCGCTCCTAGATTTGGGGAGTATCACCTATTTTTCTCCAACATATTGAAGGACACTCAAATTCACATACTTGCTGATTCAGATGAACATGAAGCTGTCCAGCAAGTTCAGGAGTTCTACGCAGACTTTGTTGCAGTTGATCCTTATCATTTCACTTTGCACATCCCTTCAAGTTATATTTATATGCTCCCAGCTGTGGTGGATCCTTCAACACTGCAACGCTTCTGTGATCGGGTTGTTGATGGTGTAGCAGCTGTCTTTTTGGCATTAAAACGGAGACCAGTTATTAGATATCAAAGGACGTCTGACATTGCCAAAAGAATAGCACACGAAGCAAATAAACTGATGTACCAAGAAGAAAGTGGTCTTTTCGATTTTAGGCGAACAGAAGTTTCACCACTGTTGTTGGCGCTTGACAGGAGAGATGATCCTGTAACCCCATTGCTCAATCAATGGACCTATCAGGCTATGGTTCATGAATTGATAGGAATCCAAGACAACAAGGTGGACTTGAAATCCATTGATAAATTTTCAAAGGATCAGGAGGAGGTTGTGTTGTCGTCGGAACAAGATTCATTTTTCAAAGCTAACATGTATGAGAATTTTGGAGATATAGGTATGAATATCAAGCGGCTGGTTGATGAATTTCAGCAAGTGTCAAAGAGCAACCAGAACATCCAAACGATAGAGGACATGGCCAAATTTGTTGACAATTATCCTGAGTACAGAAAAATGCATGGGAATGTGTCAAAGCATGTGACTTTGGTAACAGAAATGAGCAAGATAGTACAACAGCGAAAACTTATGACAGTTTCACAAACAGAACAGGAACTGGCTTGCAATGGAGGACAAGGGGCTGCGTTTGAGGCAGTGACAAATCTACTAAATGATGATAGCATATCAGATGTGGACCGGCTGCGTTTAGTCATGCTATATGCTTTGCGATATGAGAAGGATAGCCCTGTTCAGTTAATGCAGCTTTTCAACAAACTGGCTTCCCGATCTGCCAAGTATAAATCTGGGCTCGTCCAGTTTCTTTTAAAGCAAGCAGGTGTTGACAAGAGAACTGGTGATCTTTTTGGAAATCGAGATCTAATGAATATTGCCCGTAATATGGCCCGTGGGTTGAAGGGTGTTGAGAATGTGTATACCCAGCACCAACCCCTTCTTTTCCAAACCATGGAAAGCATTGTCAAAGGACGGCTGAGAGATGTGGACTACCCATTTGTTGGAAATCACTTTCAACAAGGAAGGCCACAGGAAGTAATCATCTTCATTGTTGGTGGGACAACTTATGAGGAGTCAAGATGTGTTGCTCTACAAAATGCCAGCAATCCTGGAATTCGGTTTATACTTGGTGGCTCTTCTGTTCTCAATTCTAGGAGATAG 1650 0.4358 MVLTSSARDYVNRMLQDISGMKVLILDCQTVSIVSVVYSQSELLQKEVFLVELVDSITKSKELMSHLKAVYFLRPTTENIQHLRRQLAAPRFGEYHLFFSNILKDTQIHILADSDEHEAVQQVQEFYADFVAVDPYHFTLHIPSSYIYMLPAVVDPSTLQRFCDRVVDGVAAVFLALKRRPVIRYQRTSDIAKRIAHEANKLMYQEESGLFDFRRTEVSPLLLALDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLKSIDKFSKDQEEVVLSSEQDSFFKANMYENFGDIGMNIKRLVDEFQQVSKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVQQRKLMTVSQTEQELACNGGQGAAFEAVTNLLNDDSISDVDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKSGLVQFLLKQAGVDKRTGDLFGNRDLMNIARNMARGLKGVENVYTQHQPLLFQTMESIVKGRLRDVDYPFVGNHFQQGRPQEVIIFIVGGTTYEESRCVALQNASNPGIRFILGGSSVLNSRR* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0440 549 SUPERFAMILY Sec1/munc18-like (SM) proteins 3 548 IPR036045 -
Ahy8g0440 549 Pfam Sec1 family 22 548 IPR001619 GO:0016192
Ahy8g0440 549 Gene3D - 2 128 IPR043154 -
Ahy8g0440 549 Gene3D - 138 548 IPR027482 -
Ahy8g0440 549 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 3 549 IPR001619 GO:0016192
Ahy8g0440 549 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 238 351 IPR043127 -
Ahy8g0440 549 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 45 3 549 - -
Ahy8g0440 549 Gene3D - 353 474 - -
Ahy8g0440 549 PIRSF VPS45_Sec1 1 549 IPR001619 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0440 Ahy-Chr8 8854791 8859883 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0440 K12479 - gmx:100782786 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2686 17 124303990 124311354 Ahy8g0440 8 8854791 8859883 hybridization