Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0246 ATGGTTCTTTCGAAGAAGATACATATGATTTTGAAAATATTTTTTCTTTCCAGAGCTGAAGCTTTAGAGAAGATGAGTTTCTTCAGTACCATTTTTGGGTTTTTCGGTTTCGGAATTGGAATTTCATTTGGCCTCGTCGCCGGCTATTTTCTCTTCATTTACTCTGAATCCGCCGATGTTAAGGATCCTGAGATCCAACCACTAGCGAATCAAGACTCAGAAACTCTCCAACGAATAATTCCTGAGATTCCACTTTGGATTAAAAATCCAGACTTCGATCGGGTTGACTGGCTTAACAGGCTTATCGAATACATGTGGCCCTATCTTGACAAGGCAATATGCAAGACCGCAGAGGGCATTGTGAAACCCATGATTGCAGAGCAGATTCCCAACTATAAAATTGATTCTGTAGAGTTTGAAGTGCTCACTCTCGGCAGCCTGCCCCCTACTTTTCAAGGGATGAAAGTTTATATAACTGATGAGAAGGAGTTAATTATGGAACCAAGTATCAAATGGGCTGGAAATCCTAATGTCACCGTCGCAGTTAAGGCATTTGGCTTGAAACCAACCATTCAAGTGGTGGATTTGCAAGTTTTTCTTGCACCTCGTGTCACTTTGAAACCTTTGGTTCCAAGCTTTCCTTGTTTTGCCAACATCTTTGTGTCTCTCATGGAAAAGCCACATGTTGACTTCGGACTAAAGCTTGTAGGGATTGATCTTATGTCTATTCCTGGTCTCTACAGGTTTGTTCAGGAGCTTATCAAAGATCAGGTTGCGAATATGTATTTATGGCCCAAAACCCTCGACGTTCAAATCATGGATCCGGCAAAAGCAATGAGGAGGGCTATTGGAATTTTAGTTGTAAAAGTAGTGAGAGCAATGAAGCTAAAGAAGAAAGATCTTCTTGGTGCATCTGACCCTTATGTGAAGATAAAGCTTTCTGGGGACAATATGCCAGCGAAAAAGACAACGGTGAAGCACAAGAACTTGAACCCAGAATGGAATGAAGAATTTAATTTGCTAGTGAAGGATCCACAAACACAGACACTAGAGTTTGAAGTGTATGACTGGGAGCAGGTCGGGAGGCATGATTTTATGGGTACGAATGTGGTGGCTCTGAAAGAGTTGAAAGAGGAAGAAACAAAGGTTGTAACACTGGATCTGCTGAAGAACATGGATTCGAATGATGCGGCAAATGACAAGTCCCGAGGTCAGATAGTTATGGAATTAACATATAAGGCTTTCAAGGAGGAAGAGATGGGGAAAGGGTTTGAAGAGACAGAGATGATGATGATGGATAAAGCTCCAGAAGGGACTCCTCCAGGTGGAGGATTGCTTGTAGTTGTAGTCCATGAGGCACAAGACGTGGAAGGAAAGTACCACACGAATCCACAAGTACGCCTCATTTTCAGGGGAGAGGAGAGGAAAACCAAACACGTGAAGAAGAACAGAGACCCACGGTGGGAAGAGGAGTTCCAGTTTGTGGTGGAGGAGCCTCCCACTAACGACAAATTACATGTGGAGGTTGTTAGCACTTCTTCCCGTAATTTGCTTCGTCAGAAGGAGTCTCTCGGTTACGCTGACATCTCTCTTGCTGATGTTGTTACTAACAAGAGAATCAATGAGAGATATCATCTCATAGATTCCAAGAATGGTCGCCTTCAGATTGAGCTCATGTGGAGACCTTCTCAGCCCGCCACTTGA 1704 0.4319 MVLSKKIHMILKIFFLSRAEALEKMSFFSTIFGFFGFGIGISFGLVAGYFLFIYSESADVKDPEIQPLANQDSETLQRIIPEIPLWIKNPDFDRVDWLNRLIEYMWPYLDKAICKTAEGIVKPMIAEQIPNYKIDSVEFEVLTLGSLPPTFQGMKVYITDEKELIMEPSIKWAGNPNVTVAVKAFGLKPTIQVVDLQVFLAPRVTLKPLVPSFPCFANIFVSLMEKPHVDFGLKLVGIDLMSIPGLYRFVQELIKDQVANMYLWPKTLDVQIMDPAKAMRRAIGILVVKVVRAMKLKKKDLLGASDPYVKIKLSGDNMPAKKTTVKHKNLNPEWNEEFNLLVKDPQTQTLEFEVYDWEQVGRHDFMGTNVVALKELKEEETKVVTLDLLKNMDSNDAANDKSRGQIVMELTYKAFKEEEMGKGFEETEMMMMDKAPEGTPPGGGLLVVVVHEAQDVEGKYHTNPQVRLIFRGEERKTKHVKKNRDPRWEEEFQFVVEEPPTNDKLHVEVVSTSSRNLLRQKESLGYADISLADVVTNKRINERYHLIDSKNGRLQIELMWRPSQPAT* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0246 567 Pfam C2 domain 284 382 IPR000008 -
Ahy8g0246 567 Pfam C2 domain 445 546 IPR000008 -
Ahy8g0246 567 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 91 271 IPR039010 -
Ahy8g0246 567 PRINTS C2 domain signature 301 313 IPR000008 -
Ahy8g0246 567 PRINTS C2 domain signature 350 358 IPR000008 -
Ahy8g0246 567 PRINTS C2 domain signature 328 341 IPR000008 -
Ahy8g0246 567 ProSiteProfiles C2 domain profile. 426 544 IPR000008 -
Ahy8g0246 567 CDD C2 286 388 - -
Ahy8g0246 567 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 25 561 IPR045050 GO:0008289
Ahy8g0246 567 Gene3D C2 domain 445 563 IPR035892 -
Ahy8g0246 567 ProSiteProfiles C2 domain profile. 264 386 IPR000008 -
Ahy8g0246 567 SMART C2_3c 445 543 IPR000008 -
Ahy8g0246 567 SMART C2_3c 285 385 IPR000008 -
Ahy8g0246 567 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN-RELATED 25 561 - -
Ahy8g0246 567 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 444 562 IPR035892 -
Ahy8g0246 567 Gene3D C2 domain 279 437 IPR035892 -
Ahy8g0246 567 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 91 273 IPR031468 GO:0008289
Ahy8g0246 567 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 281 415 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0246 Ahy-Chr8 5005264 5008075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0246 286 542 Lipid Metabolism Gene Families AT3G61300 27.407 1.25e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0246 - - gmx:100803978 850.892