Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy8g0141 ATGTCCTCTGATTCTGAATTCACAATTCACAATTCCCAATCCAACAATATTCCTTACTCCAATTCTGCATCATATCATCAAAACTGCAACCCTAGGGTGATCTCTCCTTCGCCGTGCTGCTTACAATCAGAATCAGCAATGCATCAAGGAGATTACACCTCCGCTCCATATTATCAATTCCCACACCTCCAAAACCCTAATCCCAACCCCTCCAATCTATACGCTTCCGCACCCCCCGTCACACCCGATTACACCCAATACGCCACCGCCACCACCACCACCACCACCACGTATTCCCCGTACCCCCCAAACCCCGAGCCTCTTCCACCACCCTCCACCGCCGCTCCCACCGCTCCTTCCTACCCTCCAACCTCCGTTAACCTCCCCTCATTCAATTCCACCTTCAATTCTCACCCTTCGTACCATCAACCACCTTCGCAGAACCAGCCCTATTTCCCGCCCTATGATCAGCATCAAACCACTCCGAATTACGCCCCTCCTCCAACCTCCTCAATTCCCTCTGAGTCCAATCCCAGTTCCTCGTACTCCTCTTTGTACAATTCGGCACCGTACACTCACGCCGGAGCTTCCGTTCCTCCGGTTCCCTCATACGATAGCCCTTACCAGAATCCAGTGAAAGCCGATCACGGCAGTGCATATTTTGACGATTTCGGAGGCCTTAATCGGAGCCGTTCAGAATTGGGATCAGTTTCGAGCTACGATGAAGGCTATGGTGATGGTGTGTATGCTTATGAAGGGGGCAAGGTGGAGCCCTACGGTGCGCGTGGCACAGCTCCTAAATCTTCGACGTGGTCCTCAACCACGTTCGATGATTATGGAAGGTCCATCAGTTTTCCCTCTCAGAATGAATCTTCTTCTGTCTCAAGTAAGATCGTGAAAGCGGTGCCAAAAGCTGATGCCCAAGAAGATGGAAAAACTGGGGTGCAAAAGTTCAGGGTCAAGTTGCTGGCAGAAAGTGGTGGCCAGAGCGCTACAGATGTTCTATGCCAGATTGGTTTGGATGGAATCCGCATGCTAGATCCAAATACAAGTCGGACATTGAGAATATATCCACTTGAGAACATAACAGGATGTGATAGACTTGACTCATCTACCTTTGCATTTTGGTCAAAGAGCCCAGTGGACATTGAACCAAGACGAATCAGATTGCAATCCAATAGCTACACTATAAACACACTTTTGGATACAGTGATTGCTGCAACCATACAGTTCAAGGAAATGAATGGAAGCAGCAGGAGGCCTCCTGAGGCATTGAAAGCAAATGAACAGCCTACAGAAAGAAAGAAAGGCTTTGGCGATTGGATGAATCTGATAAAGCCTGCCAATGAAGAGAAGGATCACTGGGTCCCAGATGAAGCAGTTTCAAAATGCAAAGATTGTCAGACTGATTTTGGGGCTTTTAATCGCAAGCATCATTGTAGGAACTGTGGTGATATTTTCTGTGACAAATGTACACAAGGTAGAATTGCTTTAACTGCCGATGCGAATGCTCAGCCAGTACGTGTTTGTGATAGATGCATGGCGGAAGTGACCCAAAGGCTGAGTAGTGCTAAAGAGTTATCAAGTAAACCTGTGTTACAGAGTCATGAGGATCTTGCCAGGAAGCTTCAGGAGGAGCTGCAGAGAAACCAAAAGACATCAGGTTCGACCTCTGGAGGATCTGGAAGACGGACAAGGGAAGTTGCATGTCCCATTTGCACTGTCCATCTGCAGGTTCAGGTGCCAAGCTCAGGTTCAGAAACCATTGAATGTGGAGTTTGCCAGCACCCATTTCTTGTGAGTGCGCATTGA 1812 0.4834 MSSDSEFTIHNSQSNNIPYSNSASYHQNCNPRVISPSPCCLQSESAMHQGDYTSAPYYQFPHLQNPNPNPSNLYASAPPVTPDYTQYATATTTTTTTYSPYPPNPEPLPPPSTAAPTAPSYPPTSVNLPSFNSTFNSHPSYHQPPSQNQPYFPPYDQHQTTPNYAPPPTSSIPSESNPSSSYSSLYNSAPYTHAGASVPPVPSYDSPYQNPVKADHGSAYFDDFGGLNRSRSELGSVSSYDEGYGDGVYAYEGGKVEPYGARGTAPKSSTWSSTTFDDYGRSISFPSQNESSSVSSKIVKAVPKADAQEDGKTGVQKFRVKLLAESGGQSATDVLCQIGLDGIRMLDPNTSRTLRIYPLENITGCDRLDSSTFAFWSKSPVDIEPRRIRLQSNSYTINTLLDTVIAATIQFKEMNGSSRRPPEALKANEQPTERKKGFGDWMNLIKPANEEKDHWVPDEAVSKCKDCQTDFGAFNRKHHCRNCGDIFCDKCTQGRIALTADANAQPVRVCDRCMAEVTQRLSSAKELSSKPVLQSHEDLARKLQEELQRNQKTSGSTSGGSGRRTREVACPICTVHLQVQVPSSGSETIECGVCQHPFLVSAH* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy8g0141 603 SUPERFAMILY PH domain-like 315 380 - -
Ahy8g0141 603 SUPERFAMILY FYVE/PHD zinc finger 453 529 IPR011011 -
Ahy8g0141 603 CDD PTB 319 375 - -
Ahy8g0141 603 MobiDBLite consensus disorder prediction 119 145 - -
Ahy8g0141 603 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 445 523 IPR013083 -
Ahy8g0141 603 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 458 518 IPR017455 -
Ahy8g0141 603 Coils Coil 533 553 - -
Ahy8g0141 603 MobiDBLite consensus disorder prediction 58 184 - -
Ahy8g0141 603 MobiDBLite consensus disorder prediction 58 99 - -
Ahy8g0141 603 PANTHER PROTEIN FREE1 47 603 IPR045893 GO:0036258|GO:0043130
Ahy8g0141 603 MobiDBLite consensus disorder prediction 100 118 - -
Ahy8g0141 603 PANTHER PROTEIN FREE1 47 603 - -
Ahy8g0141 603 Pfam FYVE zinc finger 454 518 IPR000306 GO:0046872
Ahy8g0141 603 SMART fyve_4 450 519 IPR000306 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy8g0141 Ahy-Chr8 2607865 2612020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy8g0141 436 531 EF-hand Containing Proteins AT3G14270 33.043 3.44e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy8g0141 - - ahf:112705657 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2245 17 108974704 108978882 Ahy8g0141 8 2607865 2612020 hybridization