LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy7g2215	ATGTGGCGGAGGCTCGTTTCTTCTCACTTCAAATCCCTAACTGCACTCTCACCTTCTTCTCATTCCCGATCCGCTTCGCCAGCCCTCCGATTCGCCGCCGCCGCCGCCGCCGCTCCTTCCTCCGCTTCCTTCATTAATCGCCATGTCTCCACCCAATCAGGTGGTAAGGTAAAACTTAGGGTTGAGGATGTAATGCCTATTGCCACTGGGCACGAACGCGAGGAGATTCAGGCTGATCTCGAGGGAAGGAATATTCTTGAAATAAACCATCCTGAAGGTCCATTTGGCACAAAGGAAGCACCTGCTATTGTAAAGTCTGTCTATGATAGAAGGATAGTCGGATGCCCCGGCGGTGAAGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAGGGCAAGCCTTATGAATGTCCAGTATGCTCACAATGTTTTAAGCTTGAAGTGGTGGGAGCCGGTGGTGATCCTTATGAACATGGTCACCATTGA	492	0.5102	MWRRLVSSHFKSLTALSPSSHSRSASPALRFAAAAAAAPSSASFINRHVSTQSGGKVKLRVEDVMPIATGHEREEIQADLEGRNILEINHPEGPFGTKEAPAIVKSVYDRRIVGCPGGEGEDEHDVVWFWLEKGKPYECPVCSQCFKLEVVGAGGDPYEHGHH*	164

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy7g2215	163	SUPERFAMILY	Rubredoxin-like	61	153	-	-
	Ahy7g2215	163	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	55	155	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Ahy7g2215	163	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	162	-	-
	Ahy7g2215	163	Pfam	Cytochrome c oxidase subunit Vb	68	158	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Ahy7g2215	163	CDD	Cyt_c_Oxidase_Vb	60	153	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Ahy7g2215	163	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	162	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Ahy7g2215	163	Gene3D	Cytochrome c oxidase, subunit Vb	58	151	IPR036972	GO:0005740\|GO:0005751\|GO:0006123

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy7g2215	Ahy-Chr7	80503738	80506654	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy7g2215	K02265		-	gmx:100801050	214.157

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy18g0095	18	612835	615751	Ahy7g2215	7	80503738	80506654	hybridization
	Ahy7g2215	7	80503738	80506654	Ahy9g0145	9	1414571	1418673	PCT
	Ahy9g0145	9	1414571	1418673	Ahy7g2215	7	80503738	80506654	PCT